RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 OR4K1Q8NGD4 311 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 M1APQ8TC57 530 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 PDLIM5Q96HC4 596 aaKnown RBP12.38□□□□□ -0.43
RTN3-207ENST00000536011 LPAR4Q99677 370 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 MACROD1Q9BQ69 325 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 CLK4Q9HAZ1 481 aaKnown RBP12.38□□□□□ -0.43
RTN3-207ENST00000536011 KCNK13Q9HB14 408 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 MMP25Q9NPA2 562 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 NSMCE4AQ9NXX6 385 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 SUCOQ9UBS9 1254 aaKnown RBP12.38□□□□□ -0.43
RTN3-207ENST00000536011 SH2B3Q9UQQ2 575 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 DYRK1BQ9Y463 629 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
RTN3-207ENST00000536011 MAGEB17A8MXT2 336 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 CDK2AP1O14519 115 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 F10P00742 488 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 SERPIND1P05546 499 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 ALOX12P18054 663 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 AHRP35869 848 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 TDGF1P3P51864 188 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 CASP6P55212 293 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 MEF2AQ02078 507 aaPredicted RBP12.37□□□□□ -0.43
RTN3-207ENST00000536011 MGAT5Q09328 741 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 ZRSR2Q15696 482 aaKnown RBP12.37□□□□□ -0.43
RTN3-207ENST00000536011 MEP1AQ16819 746 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 ACER2Q5QJU3 275 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 ZNF324BQ6AW86 544 aaPredicted RBP12.37□□□□□ -0.43
RTN3-207ENST00000536011 GFRALQ6UXV0 394 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 PDSS2Q86YH6 399 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 NKAPQ8N5F7 415 aaKnown RBP12.37□□□□□ -0.43
RTN3-207ENST00000536011 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 PLPP5Q8NEB5 264 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 TRPV3Q8NET8 790 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 TBC1D20Q96BZ9 403 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 PYCR2Q96C36 320 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 PEX11GQ96HA9 241 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 VPS39Q96JC1 886 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 TAAR6Q96RI8 345 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 AIF1LQ9BQI0 150 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
RTN3-207ENST00000536011 SEC14L3Q9UDX4 400 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 TEX264Q9Y6I9 313 aa12.37□□□□□ -0.43
RTN3-207ENST00000536011 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
RTN3-207ENST00000536011 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 CCDC188H7C350 402 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 LCMT2O60294 686 aaKnown RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 GALR3O60755 368 aaPredicted RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 GUCA1CO95843 209 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 FHP07954 510 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 IVDP26440 423 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 HNMTP50135 292 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 EFNA3P52797 238 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 RHAGQ02094 409 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 DEFB134Q4QY38 66 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 SFT2D3Q587I9 215 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 ZNF766Q5HY98 468 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 ZNF787Q6DD87 383 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 FRA10AC1Q70Z53 315 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 FJX1Q86VR8 437 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 LGI4Q8N135 537 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 NT5CQ8TCD5 201 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 RELTQ969Z4 430 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 CAPZA3Q96KX2 299 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 UTP23Q9BRU9 249 aaKnown RBP12.36□□□□□ -0.43
RTN3-207ENST00000536011 RUBCNLQ9H714 662 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 PELI2Q9HAT8 420 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 KCNE2Q9Y6J6 123 aa12.36□□□□□ -0.43
RTN3-207ENST00000536011 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 ZNF860A6NHJ4 632 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 TTI1O43156 1089 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 ZG16O60844 167 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 CDC123O75794 336 aaPredicted RBP12.35□□□□□ -0.43
RTN3-207ENST00000536011 SEC31AO94979 1220 aaKnown RBP12.35□□□□□ -0.43
RTN3-207ENST00000536011 UNC5CO95185 931 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 CD46P15529 392 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 COL8A1P27658 744 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 HPDP32754 393 aaPredicted RBP12.35□□□□□ -0.43
RTN3-207ENST00000536011 SCTRP47872 440 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 ITGA8P53708 1063 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 SLC12A2P55011 1212 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 KCNK10P57789 538 aa12.35□□□□□ -0.43
RTN3-207ENST00000536011 OR4D2P58180 307 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms