RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SEC31AO94979 1220 aaKnown RBP9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 STATHP02808 62 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 CELA2AP08217 269 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 ITGAMP11215 1152 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 CXCR2P25025 360 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 AVPR1BP47901 424 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 ART1P52961 327 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 ITGA8P53708 1063 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 AP1S2P56377 157 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 IL2P60568 153 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 TLE4Q04727 773 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 EEF1A2Q05639 463 aaKnown RBP9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 IRAK1BP1Q5VVH5 260 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 FAAH2Q6GMR7 532 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 FAM45BPQ6NSW5 357 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 H3F3CQ6NXT2 135 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 MTFR2Q6P444 385 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 SBSNQ6UWP8 590 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 GFRALQ6UXV0 394 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 RPTNQ6XPR3 784 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 LINC00696Q6ZRV3 163 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 STRA8Q7Z7C7 330 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 SLC26A11Q86WA9 606 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 PDSS2Q86YH6 399 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 CEP97Q8IW35 865 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 PDIK1LQ8N165 341 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 AFAP1L2Q8N4X5 818 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 MFSD9Q8NBP5 474 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 KCT2Q8NC54 265 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 CAMKVQ8NCB2 501 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 OR51Q1Q8NH59 317 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 FAM45AQ8TCE6 357 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 ANKRD7Q92527 254 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 FBXL8Q96CD0 374 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 PDLIM2Q96JY6 352 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 RUNDC3BQ96NL0 473 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 MACROD1Q9BQ69 325 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 HAUS8Q9BT25 410 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 YIPF2Q9BWQ6 316 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 RNF32Q9H0A6 362 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 RIC8BQ9NVN3 520 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 PTGFRNQ9P2B2 879 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 SH3BGRL2Q9UJC5 107 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 IKZF3Q9UKT9 509 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 SLC22A7Q9Y694 548 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 CACNA1CQ13936 2221 aa9.5□□□□□ -0.89
CLSTN3-203ENST00000534830 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 SGK494L7N484 410 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 ENO2P09104 434 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 HIST1H2AGP0C0S8 130 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 C8orf89P0DMQ9 161 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 CDH1P12830 882 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 ICAM2P13598 275 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 IL1RNP18510 177 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 HIST1H2ADP20671 130 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 TNFSF10P50591 281 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 DR1Q01658 176 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PDAP1Q13442 181 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PPP1R3AQ16821 1122 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 HP1BP3Q5SSJ5 553 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 CAPN13Q6MZZ7 669 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 XKRXQ6PP77 449 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 ASPGQ86U10 573 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 KLHL7Q8IXQ5 586 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PALM2Q8IXS6 379 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 SIRT6Q8N6T7 355 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PLPP5Q8NEB5 264 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 SLC13A3Q8WWT9 602 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PYCR2Q96C36 320 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 C14orf79Q96F83 325 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 SNF8Q96H20 258 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 HIST1H2AHQ96KK5 128 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 HIST1H2AJQ99878 128 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 TRIM51Q9BSJ1 452 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 H2AFJQ9BTM1 129 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 TUBB6Q9BUF5 446 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 MCCC2Q9HCC0 563 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 LANCL2Q9NS86 450 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PLA2G3Q9NZ20 509 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 CHMP2BQ9UQN3 213 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 PSAT1Q9Y617 370 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 SAR1BQ9Y6B6 198 aa9.49□□□□□ -0.89
CLSTN3-203ENST00000534830 TRBC2A0A5B9 178 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 OR2W5A6NFC9 320 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 CCDC188H7C350 402 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 TTI1O43156 1089 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 FAM155BO75949 473 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 WISP3O95389 354 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 WDPCPO95876 746 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 SMIM10L1P0DMW3 83 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 ZNF37AP17032 561 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 IL10P22301 178 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 GRK3P35626 688 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 XCR1P46094 333 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 SCTRP47872 440 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 CCR8P51685 355 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 TDGF1P3P51864 188 aa9.48□□□□□ -0.89
CLSTN3-203ENST00000534830 ARL4CP56559 192 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms