RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	FAM72A	Q5TYM5	149 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	BICRAL	Q6AI39	1079 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM72D	Q6L9T8	149 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GALNTL5	Q7Z4T8	443 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM72B	Q86X60	149 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RBCK1	Q9BYM8	510 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	BHLHE41	Q9C0J9	482 aa	Predicted RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TEX264	Q9Y6I9	313 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FECH	P22830	423 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CD70	P32970	193 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AP3S2	P59780	193 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LYSMD4	Q5XG99	296 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ADNP2	Q6IQ32	1131 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MRPL43	Q8N983	215 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF784	Q8NCA9	323 aa	Predicted RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ADAMTS18	Q8TE60	1221 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532		A0A075B6Q4	140 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	KLF1	Q13351	362 aa	Predicted RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	OLIG2	Q13516	323 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	IL18	Q14116	193 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DSC3	Q14574	896 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZDHHC24	Q6UX98	284 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CEP97	Q8IW35	865 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TRIM63	Q969Q1	353 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF689	Q96CS4	500 aa	Predicted RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MGME1	Q9BQP7	344 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GIN1	Q9NXP7	522 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PLCL2	Q9UPR0	1127 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MAU2	Q9Y6X3	613 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GOLGA4	Q13439	2230 aa	Known RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	AHDC1	Q5TGY3	1603 aa	Predicted RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PSMD9	O00233	223 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CHRM1	P11229	460 aa	Predicted RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GMFB	P60983	142 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MLLT1	Q03111	559 aa	Predicted RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SCAP	Q12770	1279 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RGS21	Q2M5E4	152 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ACSBG2	Q5FVE4	666 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TCTE1	Q5JU00	501 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RNF111	Q6ZNA4	994 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LRRC69	Q6ZNQ3	347 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SLC22A8	Q8TCC7	542 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	UFD1	Q92890	307 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DPH7	Q9BTV6	452 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MEIS3P2	A8K0S8	358 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SOX30	O94993	753 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MEF2A	Q02078	507 aa	Predicted RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF550	Q7Z398	422 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	NARS2	Q96I59	477 aa	Known RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TPT1P8	Q9HAU6	139 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF222	Q9UK12	451 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LOC110117498-PIK3R3	F6TDL0	507 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PRAMEF26	H0Y7S4	382 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TMX2-CTNND1	H3BSU7	103 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DHFR	P00374	187 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GBA	P04062	536 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TNFRSF4	P43489	277 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ACY1	Q03154	408 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MRPL49	Q13405	166 aa	Known RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PACS2	Q86VP3	889 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C1orf216	Q8TAB5	229 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LRRC58	Q96CX6	371 aa		15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CNDP2	Q96KP4	475 aa	Known RBP	15.21	■□□□□ 0.03
NCAPD3-213	ENST00000534532		A0A1W2PRG6	482 aa		15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532		M0QX08	132 aa		15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CTBP2	P56545	445 aa		15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM214	Q6NUQ4	689 aa	Known RBP	15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMCO6	Q96DC7	493 aa		15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CPNE2	Q96FN4	548 aa	Predicted RBP	15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZBED3	Q96IU2	234 aa	Predicted RBP	15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TTYH1	Q9H313	450 aa	Predicted RBP	15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TBC1D17	Q9HA65	648 aa		15.21	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LRP6	O75581	1613 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SDC3	O75056	442 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EMX2	Q04743	252 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CYP27C1	Q4G0S4	372 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ARSJ	Q5FYB0	599 aa	Predicted RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF648	Q5T619	568 aa	Predicted RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NCEH1	Q6PIU2	408 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	15.2	■□□□□ 0.02	2e-6	■■■■■ 40.9
NCAPD3-213	ENST00000534532	LGI4	Q8N135	537 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SGCD	Q92629	289 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SH3YL1	Q96HL8	342 aa	Predicted RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ADAD1	Q96M93	576 aa	Known RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	BRD7	Q9NPI1	651 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RAB26	Q9ULW5	256 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CHD2	O14647	1828 aa	Known RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CDC123	O75794	336 aa	Predicted RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IL12A	P29459	219 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DGKQ	P52824	942 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RAB2A	P61019	212 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PLCXD2	Q0VAA5	305 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IQCC	Q4KMZ1	466 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DEFB134	Q4QY38	66 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CLEC12A	Q5QGZ9	265 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DCAF12L1	Q5VU92	463 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GPR153	Q6NV75	609 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NFKBID	Q8NI38	313 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LRTOMT	Q8WZ04	291 aa		15.2	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms