RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	ALS2CL	Q60I27	953 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	TRAPPC5	Q8IUR0	188 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	FAM98A	Q8NCA5	519 aa	Known RBP	5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	OR1L3	Q8NH93	324 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	FAM71B	Q8TC56	605 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	DTX3L	Q8TDB6	740 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	GRHL3	Q8TE85	626 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	FAR1	Q8WVX9	515 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	TEKT4	Q8WW24	435 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	ZFPM2	Q8WW38	1151 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	ITLN2	Q8WWU7	325 aa	Predicted RBP	5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	PDLIM2	Q96JY6	352 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	TSGA13	Q96PP4	275 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	TRAPPC9	Q96Q05	1148 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	TRIB3	Q96RU7	358 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	TLR10	Q9BXR5	811 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	ADGRE3	Q9BY15	652 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	PITPNM3	Q9BZ71	974 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	XPO4	Q9C0E2	1151 aa	Known RBP	5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	KIR3DX1	Q9H7L2	352 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	FANCE	Q9HB96	536 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	MAGEE1	Q9HCI5	957 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	SEPT11	Q9NVA2	429 aa	Known RBP	5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	HAUS2	Q9NVX0	235 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	RBM22	Q9NW64	420 aa	Known RBP eCLIP	5.82	□□□□□ -1.48	1e-6	■■■■□ 21.2
PICALM-223	ENST00000534412	HRASLS2	Q9NWW9	162 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	SOHLH2	Q9NX45	425 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	P4HTM	Q9NXG6	502 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	POMT2	Q9UKY4	750 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	CDYL	Q9Y232	598 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	PCDHA13	Q9Y5I0	950 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	MRFAP1	Q9Y605	127 aa		5.82	□□□□□ -1.48
PICALM-223	ENST00000534412	NIPBL	Q6KC79	2804 aa	eCLIP	5.82	□□□□□ -1.48	6e-6	■□□□□ 9
PICALM-223	ENST00000534412	NAV3	Q8IVL0	2385 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	PCNX1	Q96RV3	2341 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412		A0A1W2PS29	197 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	KLHL33	A6NCF5	533 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412		H3BMH7	237 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	LCA5L	O95447	670 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	HBQ1	P09105	142 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	MYBL2	P10244	700 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	CYP2A7	P20853	494 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	CCNC	P24863	283 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	OTX2	P32243	289 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	TDGF1P3	P51864	188 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	OTUD4	Q01804	1114 aa	Known RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	SLC25A11	Q02978	314 aa	Known RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	PIGF	Q07326	219 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	TMEM115	Q12893	351 aa	Predicted RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	PAFAH1B3	Q15102	231 aa	Known RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	KRT31	Q15323	416 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	KAZN	Q674X7	775 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	NCBP2-AS2	Q69YL0	99 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	FCRL6	Q6DN72	434 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	TXNRD3NB	Q6F5E7	133 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	RPUSD3	Q6P087	351 aa	Known RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	PPP1R32	Q7Z5V6	425 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	FJX1	Q86VR8	437 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	AMZ2	Q86W34	360 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	NIPA2	Q8N8Q9	360 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	OR2Y1	Q8NGV0	311 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	HSPH1	Q92598	858 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	RAB24	Q969Q5	203 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	FBXL20	Q96IG2	436 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	PPM1M	Q96MI6	270 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	CHST11	Q9NPF2	352 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	IMP3	Q9NV31	184 aa	Known RBP	5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	TRIM10	Q9UDY6	481 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	SLC24A2	Q9UI40	661 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	ZNF711	Q9Y462	761 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	TTLL3	Q9Y4R7	772 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	SCIN	Q9Y6U3	715 aa		5.81	□□□□□ -1.48
PICALM-223	ENST00000534412	SPG11	Q96JI7	2443 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	OR6C74	A6NCV1	312 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	SLC9B1P1	A6NJY1	282 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	TMEM150C	B9EJG8	249 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412		E7EQ34	232 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	AGPS	O00116	658 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	PEX12	O00623	359 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	MGST3	O14880	152 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	PCDH17	O14917	1159 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	ZNF749	O43361	778 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	SGTA	O43765	313 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	CNOT3	O75175	753 aa	Known RBP	5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	ZFPL1	O95159	310 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	UMOD	P07911	640 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	CD63	P08962	238 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	CCDC172	P0C7W6	258 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	GZMA	P12544	262 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	FER	P16591	822 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	HLA-DPA1	P20036	260 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	HMGCL	P35914	325 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	CD86	P42081	329 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	ARCN1	P48444	511 aa	Known RBP	5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	ARSE	P51690	589 aa		5.8	□□□□□ -1.48
PICALM-223	ENST00000534412	CTSC	P53634	463 aa		5.8	□□□□□ -1.48

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