RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	GAGE2A	Q6NT46	116 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	MFSD12	Q6NUT3	480 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	ARHGAP11A	Q6P4F7	1023 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	ARSK	Q6UWY0	536 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	DLEU7	Q6UYE1	221 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	ZYG11A	Q6WRX3	759 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	ZNF573	Q86YE8	665 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-223	ENST00000533979	BEST3	Q8N1M1	668 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	AADAT	Q8N5Z0	425 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	SLCO4A1	Q96BD0	722 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	IGSF21	Q96ID5	467 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	TXNDC15	Q96J42	360 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	SSX3	Q99909	188 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	ZNF559	Q9BR84	538 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	TPPP3	Q9BW30	176 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	CDH20	Q9HBT6	801 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	DNAJC4	Q9NNZ3	241 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
ATM-223	ENST00000533979	CLIP2	Q9UDT6	1046 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE2D	Q9UEU5	116 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.37	□□□□□ -1.71
ATM-223	ENST00000533979	PAM16	Q9Y3D7	125 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	GRIP1	Q9Y3R0	1128 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	MYOM1	P52179	1685 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	UBR1	Q8IWV7	1749 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	WDR90	Q96KV7	1748 aa		4.37	□□□□□ -1.71
ATM-223	ENST00000533979	RPRD2	Q5VT52	1461 aa	Known RBP	4.37	□□□□□ -1.71
ATM-223	ENST00000533979	GLI3	P10071	1580 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PLSCR5	A0PG75	271 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	NEMP2	A6NFY4	417 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	MAGEB2	O15479	319 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CYTIP	O60759	359 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PRAF2	O60831	178 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE7	O76087	117 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	ZNF432	O94892	652 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PCCB	P05166	539 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE12F	P0CL80	117 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE12G	P0CL81	117 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE12I	P0CL82	117 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	THRB	P10828	461 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	HNRNPA2B1	P22626	353 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	IL4R	P24394	825 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	HSD17B3	P37058	310 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	APOBEC1	P41238	236 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	SLC9A3	P48764	834 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	TRPC1	P48995	793 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	DHPS	P49366	369 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	METAP1	P53582	386 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CSNK2A1	P68400	391 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GBE1	Q04446	702 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	TROAP	Q12815	778 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	DLG1	Q12959	904 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PPP1R8	Q12972	351 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE1	Q13065	139 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GAGE4	Q13068	117 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	IFT88	Q13099	833 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CUL3	Q13618	768 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	GIT2	Q14161	759 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CTU2	Q2VPK5	515 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	ATAD3B	Q5T9A4	648 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	FRG2	Q64ET8	278 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	BTNL8	Q6UX41	500 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	B3GLCT	Q6Y288	498 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	TMPRSS11F	Q6ZWK6	438 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	VASH2	Q86V25	355 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	NRROS	Q86YC3	692 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PGBD5	Q8N414	524 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	RFLNB	Q8N5W9	214 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	EMC1	Q8N766	993 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	RASGEF1A	Q8N9B8	481 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	KIAA0895	Q8NCT3	520 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CSNK2A3	Q8NEV1	391 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	OR56B2P	Q8NGI1	322 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	OR56B1	Q8NGI3	324 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	ARRDC2	Q8TBH0	407 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CKAP2	Q8WWK9	683 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	NR4A3	Q92570	626 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	FAM46B	Q96A09	425 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	CCDC51	Q96ER9	411 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	STAMBPL1	Q96FJ0	436 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	MYADM	Q96S97	322 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	DDX50	Q9BQ39	737 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	HAUS8	Q9BT25	410 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	POLR1E	Q9GZS1	481 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	RAB33B	Q9H082	229 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	NCOR1P1	Q9H4R4	102 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PALMD	Q9NP74	551 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	OSER1	Q9NX31	292 aa		4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PTBP2	Q9UKA9	531 aa	Known RBP	4.36	□□□□□ -1.71
ATM-223	ENST00000533979	PIK3C2B	O00750	1634 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	IQGAP3	Q86VI3	1631 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	TET3	O43151	1660 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	KIAA1210	Q9ULL0	1709 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	TAF1	P21675	1872 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	UTRN	P46939	3433 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	FAM230A	A0A1W2PPH8	454 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	MACROD2	A1Z1Q3	448 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	TRIM49B	A6NDI0	452 aa		4.35	□□□□□ -1.71

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