RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CDV3Q9UKY7 258 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-218ENST00000533761 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-218ENST00000533761 CPED1A4D0V7 1026 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 GSAPA4D1B5 854 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 EME2A4GXA9 379 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 CFAP73A6NFT4 308 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 BBIP1A8MTZ0 92 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TNFSF14O43557 240 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PRPS2P11908 318 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 DDX5P17844 614 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PTX3P26022 381 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 GPR3P46089 330 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 RPL38P63173 70 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ACSM2AQ08AH3 577 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 KLF10Q13118 480 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 DDX39BQ13838 428 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TCHHL1Q5QJ38 904 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 CATSPEREQ5SY80 951 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ACSM2BQ68CK6 577 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PIP4P1Q86T03 277 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ZFAND4Q86XD8 727 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 C2orf73Q8N5S3 287 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 GLB1L3Q8NCI6 653 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 OR2L3Q8NG85 312 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 OR2A1Q8NGT9 310 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 HUS1BQ8NHY5 278 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 WDR20Q8TBZ3 569 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TSPEARQ8WU66 669 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 RAB3IPQ96QF0 476 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC38A3Q99624 504 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 BRINP2Q9C0B6 783 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 XKR8Q9H6D3 395 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 SDR39U1Q9NRG7 319 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ZIM2Q9NZV7 527 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PIEZO1Q92508 2521 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 COL5A1P20908 1838 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 A0A1W2PPV9 198 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TRBC2A0A5B9 178 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 LILRA5A6NI73 299 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC30A4O14863 429 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PPM1DO15297 605 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 CSRP1P21291 193 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ACP1P24666 158 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PIK3R1P27986 724 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ALDH4A1P30038 563 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 SCTRP47872 440 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 HTR6P50406 440 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 EPHA4P54764 986 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 HNRNPH2P55795 449 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 KCNK10P57789 538 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 REEP5Q00765 189 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 RBBP5Q15291 538 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TRIP6Q15654 476 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 MMEL1Q495T6 779 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TMEM198Q66K66 360 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 Q6ZSR9 355 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PAGE2Q7Z2X7 111 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 FAM129CQ86XR2 697 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ZNF655Q8N720 491 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PCYOX1LQ8NBM8 494 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 TRPV3Q8NET8 790 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 OR4K1Q8NGD4 311 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 OR10G6Q8NH81 332 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 BAHD1Q8TBE0 780 aaPredicted RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 MTFMTQ96DP5 389 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 QRFPRQ96P65 431 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 HBEGFQ99075 208 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 MTERF1Q99551 399 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 MRPL1Q9BYD6 325 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ACPTQ9BZG2 426 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 C1orf21Q9H246 121 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 RHBGQ9H310 441 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 ZNF385DQ9H6B1 395 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 AIG1Q9NVV5 245 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 G3BP2Q9UN86 482 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 RUVBL1Q9Y265 456 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 PTGDR2Q9Y5Y4 395 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 RNF215Q9Y6U7 377 aa10.48□□□□□ -0.73
CCDC90B-218ENST00000533761 LY6G6EA0A0G2JKS1 128 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 OR6C74A6NCV1 312 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 PCNX2A6NKB5 2137 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 H7BY64 318 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 TM4SF5O14894 197 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 ANGPT2O15123 496 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 GYG2O15488 501 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC22A3O75751 556 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SEMA3DO95025 777 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 CBX6O95503 412 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 GP1BAP07359 652 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SNRPB2P08579 225 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 MYF5P13349 255 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 AMD1P17707 334 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 CD22P20273 847 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 PTPN4P29074 926 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 AHRP35869 848 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 GSTM5P46439 218 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms