RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RAE1P78406 368 aaKnown RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 ZXDBP98169 803 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 IFITM2Q01629 132 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 LRRC74AQ0VAA2 488 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 CRHR2Q13324 411 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 MICAQ29983 383 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 IFI44LQ53G44 452 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 SLX4IPQ5VYV7 408 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 CCBE1Q6UXH8 406 aaPredicted RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 GDPD3Q7L5L3 318 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 CCDC190Q86UF4 302 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 HEATR4Q86WZ0 1026 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 VPS37AQ8NEZ2 397 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 CDC26Q8NHZ8 85 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 SPPL2AQ8TCT8 520 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ADAMTS19Q8TE59 1207 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 MAL2Q969L2 176 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 SCRN2Q96FV2 425 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ZNF486Q96H40 463 aaPredicted RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 CENPOQ9BU64 300 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ATG10Q9H0Y0 220 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 BRF2Q9HAW0 419 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 NPAP1Q9NZP6 1156 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ZNF282Q9UDV7 671 aaPredicted RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 MBD1Q9UIS9 605 aaPredicted RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 OBSL1O75147 1896 aa16■□□□□ 0.15
CTSB-228ENST00000533455 LOC110117498-PIK3R3F6TDL0 507 aa16■□□□□ 0.15
CTSB-228ENST00000533455 RGS13O14921 159 aa16■□□□□ 0.15
CTSB-228ENST00000533455 KMOO15229 486 aa16■□□□□ 0.15
CTSB-228ENST00000533455 HLA-EP13747 358 aa16■□□□□ 0.15
CTSB-228ENST00000533455 AQP1P29972 269 aa16■□□□□ 0.15
CTSB-228ENST00000533455 PIK3CBP42338 1070 aa16■□□□□ 0.15
CTSB-228ENST00000533455 ACLYP53396 1101 aa16■□□□□ 0.15
CTSB-228ENST00000533455 ST3GAL4Q11206 333 aa16■□□□□ 0.15
CTSB-228ENST00000533455 SF3B4Q15427 424 aaKnown RBP eCLIP16■□□□□ 0.151e-7■■■□□ 16.5
CTSB-228ENST00000533455 SOWAHCQ53LP3 525 aaPredicted RBP16■□□□□ 0.15
CTSB-228ENST00000533455 ZDHHC20Q5W0Z9 365 aa16■□□□□ 0.15
CTSB-228ENST00000533455 CST9Q5W186 159 aa16■□□□□ 0.15
CTSB-228ENST00000533455 GRHL2Q6ISB3 625 aa16■□□□□ 0.15
CTSB-228ENST00000533455 NLRP8Q86W28 1048 aa16■□□□□ 0.15
CTSB-228ENST00000533455 LGI4Q8N135 537 aa16■□□□□ 0.15
CTSB-228ENST00000533455 NAGSQ8N159 534 aa16■□□□□ 0.15
CTSB-228ENST00000533455 PIK3R3Q92569 461 aa16■□□□□ 0.15
CTSB-228ENST00000533455 ECHDC3Q96DC8 303 aa16■□□□□ 0.15
CTSB-228ENST00000533455 ASIC4Q96FT7 647 aa16■□□□□ 0.15
CTSB-228ENST00000533455 CDCA4Q9BXL8 241 aa16■□□□□ 0.15
CTSB-228ENST00000533455 ARHGAP39Q9C0H5 1083 aa16■□□□□ 0.15
CTSB-228ENST00000533455 RNF167Q9H6Y7 350 aa16■□□□□ 0.15
CTSB-228ENST00000533455 RLIMQ9NVW2 624 aa16■□□□□ 0.15
CTSB-228ENST00000533455 TMPRSS11EQ9UL52 423 aa16■□□□□ 0.15
CTSB-228ENST00000533455 CASP8AP2Q9UKL3 1982 aa16■□□□□ 0.15
CTSB-228ENST00000533455 CENPFP49454 3210 aa16■□□□□ 0.15
CTSB-228ENST00000533455 FAM47E-STBD1D6RA91 191 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 H0YIV9 168 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 KPNA5O15131 536 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 EFEMP2O95967 443 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 IDSP22304 550 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 BMPR1AP36894 532 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 IDH2P48735 452 aaKnown RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 ZNF157P51786 506 aaPredicted RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 PTSQ03393 145 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 CARTPTQ16568 116 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 XKR6Q5GH73 641 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTSB-228ENST00000533455 KLHDC8AQ8IYD2 350 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 SLC7A5P1Q8MH63 180 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 OR2AP1Q8NGE2 309 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 ATL1Q8WXF7 558 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 Q96MT0 163 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 MCCC1Q96RQ3 725 aaPredicted RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 NIPSNAP1Q9BPW8 284 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 CHCHD6Q9BRQ6 235 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 CCM2Q9BSQ5 444 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 CCDC32Q9BV29 185 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 BBS2Q9BXC9 721 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 MRPL9Q9BYD2 267 aaKnown RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 ABCB8Q9NUT2 735 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 CNOT2Q9NZN8 540 aaKnown RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 CFL2Q9Y281 166 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 KRT87PA6NCN2 255 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 A8MU76 341 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 RNASET2O00584 256 aaKnown RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 PCDH7O60245 1069 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 LHCGRP22888 699 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 RCVRNP35243 200 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 SOX6P35712 828 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 HNF4AP41235 474 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 MVDP53602 400 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 SPIBQ01892 262 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 SEMG2Q02383 582 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 PCDH1Q08174 1060 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 DOC2AQ14183 400 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 EXOC3L2Q2M3D2 409 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 TIMM50Q3ZCQ8 353 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 DGKKQ5KSL6 1271 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 RFLNAQ6ZTI6 216 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 USP45Q70EL2 814 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 NPAS4Q8IUM7 802 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms