RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 LINGO1Q96FE5 620 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 PDLIM5Q96HC4 596 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 VPS50Q96JG6 964 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 PPM1MQ96MI6 270 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 CCM2Q9BSQ5 444 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 TSSK1BQ9BXA7 367 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZCCHC2Q9C0B9 1178 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 DERL2Q9GZP9 239 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 LHPPQ9H008 270 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ENKD1Q9H0I2 346 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 SLC6A20Q9NP91 592 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 CPSF2Q9P2I0 782 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 SEC14L3Q9UDX4 400 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 SH3BGRL2Q9UJC5 107 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 POMT2Q9UKY4 750 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 PSMD13Q9UNM6 376 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 TARM1B6A8C7 271 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 KPNA5O15131 536 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 BIRC5O15392 142 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZBTB14O43829 449 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 POP7O75817 140 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 TSPAN12O95859 305 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 CRYABP02511 175 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 FTH1P02794 183 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 UMODP07911 640 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 SBK3P0C264 359 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 CBSLP0DN79 551 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 POLR2CP19387 275 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 TFEBP19484 476 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 MMP11P24347 488 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 CBSP35520 551 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 KCNC1P48547 511 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 PRLHRP49683 370 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 RGS4P49798 205 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 ADORA2A-AS1P86434 159 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 MFAP5Q13361 173 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 TTLL9Q3SXZ7 439 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 BCL7AQ4VC05 210 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 FAAH2Q6GMR7 532 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 RHBDD2Q6NTF9 364 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 CYHR1Q6ZMK1 362 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 NUDCD3Q8IVD9 361 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 CATSPER1Q8NEC5 780 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 ELMO1Q92556 727 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 N4BP2L2Q92802 583 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 TAAR6Q96RI8 345 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 MRPL57Q9BQC6 102 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 MRPL46Q9H2W6 279 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 TFB2MQ9H5Q4 396 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 ALG9Q9H6U8 611 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 KIR3DX1Q9H7L2 352 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 IKZF3Q9UKT9 509 aa10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 DNMT3AQ9Y6K1 912 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC4-213ENST00000533149 DCHS2Q6V1P9 2916 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 PCM1Q15154 2024 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 TRAV17A0A0B4J275 112 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 DYTNA2CJ06 578 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 GSAPA4D1B5 854 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 G3V2L1 256 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 CDC7O00311 574 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 NEFHP12036 1026 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 KLK2P20151 261 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 ALDH3A1P30838 453 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 CSNK1G2P78368 415 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 ARG2P78540 354 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 HSPA14Q0VDF9 509 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 GBX1Q14549 363 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 OR4D1Q15615 310 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 TECRLQ5HYJ1 363 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 C1orf189Q5VU69 101 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 MEX3BQ6ZN04 569 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 LINC00696Q6ZRV3 163 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 PIWIL4Q7Z3Z4 852 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 C10orf107Q8IVU9 208 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 ACBD4Q8NC06 268 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 DNAJB8Q8NHS0 232 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 RDH11Q8TC12 318 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 KIAA1191Q96A73 305 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 MAGEB18Q96M61 343 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 MECRQ9BV79 373 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 ABI3Q9P2A4 366 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 XPR1Q9UBH6 696 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 TSR3Q9UJK0 312 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 MID2Q9UJV3 735 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 PCDHGB6Q9Y5F9 930 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 COLEC10Q9Y6Z7 277 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 TACC2O95359 2948 aa10.78□□□□□ -0.68
TRAPPC4-213ENST00000533149 DNHD1Q96M86 4753 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 DLX3O60479 287 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC19A2O60779 497 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 GPC4O75487 556 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 OR2B3O76000 313 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 MYL2P10916 166 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 FOSL1P15407 271 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 ST6GAL1P15907 406 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 TAC1P20366 129 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms