RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 UGT2B7P16662 529 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 CASP2P42575 452 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 OR1D5P58170 312 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 PAGE3Q5JUK9 113 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 KIAA1614Q5VZ46 1190 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 HACD2Q6Y1H2 254 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 TRIM73Q86UV7 250 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 ZNF740Q8NDX6 193 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 ROPN1LQ96C74 230 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 PPM1MQ96MI6 270 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 TRIM8Q9BZR9 551 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 SPAG4Q9NPE6 437 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 ASCC3Q8N3C0 2202 aaKnown RBP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 LY6G6EA0A0G2JKS1 128 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 C2orf74A8MZ97 194 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 LMNAP02545 664 aaKnown RBP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 SLC7A2P52569 658 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 DGKQP52824 942 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 MS4A2Q01362 244 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 SLBPQ14493 270 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 NKAIN2Q5VXU1 208 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 ADCK2Q7Z695 626 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 KRTCAP2Q8N6L1 136 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 Q8N9G6 341 aaPredicted RBP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 FAM181AQ8N9Y4 354 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 NAF1Q96HR8 494 aaKnown RBP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 MAGEB10Q96LZ2 347 aaPredicted RBP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 EHD1Q9H4M9 534 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 SLC6A20Q9NP91 592 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 SEMA4GQ9NTN9 838 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 GMPR2Q9P2T1 348 aaKnown RBP17.71■□□□□ 0.43
SMPD1-208ENST00000533123 ENTPD2Q9Y5L3 495 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 U3KQA8 63 aa17.71■□□□□ 0.43
SMPD1-208ENST00000533123 CPED1A4D0V7 1026 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 H0YIV9 168 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 DLL1O00548 723 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 CDX4O14627 284 aaPredicted RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 CASC3O15234 703 aaKnown RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SH3BGRLO75368 114 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 PROS1P07225 676 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 BCKDHAP12694 445 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 ME2P23368 584 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 JAK1P23458 1154 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 CMPK1P30085 196 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 HNF4AP41235 474 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SESN3P58005 492 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 MAD2L1Q13257 205 aaPredicted RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 E2F2Q14209 437 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 TLR1Q15399 786 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 NR0B2Q15466 257 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 TAF11Q15544 211 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SMU1Q2TAY7 513 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 CACHD1Q5VU97 1274 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 GUSBP11Q6P575 273 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SLC2A7Q6PXP3 512 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 PRR23CQ6ZRP0 262 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 FAM129CQ86XR2 697 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 ABHD11Q8NFV4 315 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 PYDC1Q8WXC3 89 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 WDR34Q96EX3 536 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 GPATCH1Q9BRR8 931 aaKnown RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 DPH7Q9BTV6 452 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 DNAAF2Q9NVR5 837 aaKnown RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SLAMF8Q9P0V8 285 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 NCDNQ9UBB6 729 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 ZFHX2Q9C0A1 2572 aaPredicted RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 PRORSD1PA6NEY8 169 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 EEDO75530 441 aaKnown RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SLC34A2O95436 690 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 ZNF883P0CG24 379 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 PCNAP12004 261 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 NBL1P41271 181 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 CCR8P51685 355 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 ABATP80404 500 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 SUZ12Q15022 739 aaKnown RBP17.7■□□□□ 0.42
SMPD1-208ENST00000533123 ARMC6Q6NXE6 501 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 KLHL35Q6PF15 583 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 TSPEARQ8WU66 669 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 LRRC58Q96CX6 371 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 EFCAB11Q9BUY7 163 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 KLHL25Q9H0H3 589 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 LRRC42Q9Y546 428 aa17.7■□□□□ 0.42
SMPD1-208ENST00000533123 RIF1Q5UIP0 2472 aaKnown RBP17.69■□□□□ 0.42
SMPD1-208ENST00000533123 MAP3K7O43318 606 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 B4GAT1O43505 415 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 ETHE1O95571 254 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 PRPH2P23942 346 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 TACR1P25103 407 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 CAPZBP47756 277 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 CSNK1G2P78368 415 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 NFYCQ13952 458 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 AMZ1Q400G9 498 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 COQ5Q5HYK3 327 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 SPESP1Q6UW49 350 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 OR7G3Q8NG95 312 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 SLC26A7Q8TE54 656 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 CCDC74AQ96AQ1 378 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 CMTM7Q96FZ5 175 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 EBPLQ9BY08 206 aa17.69■□□□□ 0.42
SMPD1-208ENST00000533123 IRF2BPLQ9H1B7 796 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms