RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 SLC16A5O15375 505 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 NDUFS4O43181 175 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC19A2O60779 497 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 TSPAN12O95859 305 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 CCND1P24385 295 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 GRK3P35626 688 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 OLR1P78380 273 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 RBPJQ06330 500 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 USP10Q14694 798 aaKnown RBP16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 OR1C1Q15619 314 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 NSDHLQ15738 373 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 EXT1Q16394 746 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 MEP1AQ16819 746 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 SPINK14Q6IE38 97 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 BNC2Q6ZN30 1099 aaPredicted RBP16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 PALM2Q8IXS6 379 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF808Q8N4W9 903 aaPredicted RBP16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 AFAP1L2Q8N4X5 818 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF740Q8NDX6 193 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 PLPP5Q8NEB5 264 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 SCMH1Q96GD3 660 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 OR4K3Q96R72 315 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 UTP23Q9BRU9 249 aaKnown RBP16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 SPNS1Q9H2V7 528 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC22A7Q9Y694 548 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 PDZD2O15018 2839 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 PKDREJQ9NTG1 2253 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 GABRR3A8MPY1 467 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 TTI1O43156 1089 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 AHSGP02765 367 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 SNRPB2P08579 225 aaKnown RBP16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 HTR1EP28566 365 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 ADORA2A-AS1P86434 159 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 ACTN3Q08043 901 aaPredicted RBP16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 DEFB134Q4QY38 66 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 MSS51Q4VC12 460 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 KIF2BQ8N4N8 673 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 ABHD11Q8NFV4 315 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 OR56A3Q8NH54 315 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 GPR137Q96N19 417 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 OR1F2PQ96R84 312 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 LPAR4Q99677 370 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 HAUS8Q9BT25 410 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 JRKLQ9Y4A0 524 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 PCDHGB6Q9Y5F9 930 aa16.06■□□□□ 0.16
RPUSD4-207ENST00000532800 TEP1Q99973 2627 aaKnown RBP16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 CTAGE15A4D2H0 777 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 MAGEB17A8MXT2 336 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNHIT1O43257 154 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 OR1F1O43749 312 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 GALR3O60755 368 aaPredicted RBP16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 SERPIND1P05546 499 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 FHP07954 510 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 HIST1H2AGP0C0S8 130 aaPredicted RBP16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 HIST1H2ADP20671 130 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 FNTAP49354 379 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 CCR8P51685 355 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 OR4D2P58180 307 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC26A5P58743 744 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 HERC3Q15034 1050 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 CATSPEREQ5SY80 951 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF468Q5VIY5 522 aaPredicted RBP16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 RPTNQ6XPR3 784 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 GALNTL5Q7Z4T8 443 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 CTAGE6Q86UF2 777 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 IGDCC3Q8IVU1 814 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 CNTN4Q8IWV2 1026 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 OR4K1Q8NGD4 311 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 SNF8Q96H20 258 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 HIST1H2AHQ96KK5 128 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 FRMD6Q96NE9 622 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 NAP1L3Q99457 506 aaPredicted RBP16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 HIST1H2AJQ99878 128 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 H2AFJQ9BTM1 129 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 FAM129AQ9BZQ8 928 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 PLAC1Q9HBJ0 212 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 ARL15Q9NXU5 204 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 IKZF3Q9UKT9 509 aa16.05■□□□□ 0.16
RPUSD4-207ENST00000532800 AKAP9Q99996 3911 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 TRBC2A0A5B9 178 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 ASPDHA6ND91 283 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 NPIPA5E9PKD4 350 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 CHST10O43529 356 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 NRDCO43847 1150 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 NEURL1O76050 574 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 GUCA1CO95843 209 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF888P0CJ79 500 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 CD46P15529 392 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 ALOX12P18054 663 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 EEF1DP29692 281 aaKnown RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 ALDH6A1Q02252 535 aaKnown RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 OC90Q02509 493 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 PDAP1Q13442 181 aaKnown RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 PPP1R7Q15435 360 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 CDSNQ15517 529 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF630Q2M218 657 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 SPANXN3Q5MJ09 141 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 DUPD1Q68J44 220 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms