RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 GALNTL5Q7Z4T8 443 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 THAP3Q8WTV1 239 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 FRMD6Q96NE9 622 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 PCBD2Q9H0N5 130 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 XAB2Q9HCS7 855 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 LANCL2Q9NS86 450 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 IARS2Q9NSE4 1012 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 TRMT6Q9UJA5 497 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF835Q9Y2P0 537 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 COMMD10Q9Y6G5 202 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 EML6Q6ZMW3 1958 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 HCFC1P51610 2035 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 ASPDHA6ND91 283 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 B3GALT4O96024 378 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 CD46P15529 392 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 OLR1P78380 273 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 HSF1Q00613 529 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 OC90Q02509 493 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 PHKG1Q16816 387 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF468Q5VIY5 522 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 PCGF5Q86SE9 256 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 SPPL2CQ8IUH8 684 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF295-AS1Q8N0V1 137 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 KIF2BQ8N4N8 673 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 MFSD9Q8NBP5 474 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 MCUQ8NE86 351 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 LPAR4Q99677 370 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 CDCP1Q9H5V8 836 aa17.32■□□□□ 0.36
SSSCA1-206ENST00000531405 MAGEB17A8MXT2 336 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 EIF3FO00303 357 aaPredicted RBP17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 NEURL1O76050 574 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC35G6P0C7Q6 338 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 NPPBP16860 134 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 MAGEA3P43357 314 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SMSP52788 366 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 OR4D2P58180 307 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC26A5P58743 744 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 KRTCAP3Q53RY4 240 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 Q6ZPB1 254 aaPredicted RBP17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 TMEM178AQ8NBL3 297 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF740Q8NDX6 193 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 PLPP5Q8NEB5 264 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 CALML6Q8TD86 181 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 MAGOHBQ96A72 148 aaKnown RBP17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 PYCR2Q96C36 320 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 MS4A14Q96JA4 679 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SIGLEC10Q96LC7 697 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SGPP1Q9BX95 441 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 PARVBQ9HBI1 364 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 MEMO1Q9Y316 297 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC22A7Q9Y694 548 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF407Q9C0G0 2248 aa17.31■□□□□ 0.36
SSSCA1-206ENST00000531405 GOLGA6L6A8MZA4 724 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 NDC80O14777 642 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 NDUFS4O43181 175 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 C8GP07360 202 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 SP1P08047 785 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 CCDC175P0C221 793 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 GRK3P35626 688 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 CDKN2DP55273 166 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 DHX9Q08211 1270 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 MAPKAPK3Q16644 382 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 RBM20Q5T481 1227 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 PAQR3Q6TCH7 311 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 LCTLQ6UWM7 567 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 C3P1Q6ZMU1 363 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 PALM2Q8IXS6 379 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 LMNTD2Q8IXW0 634 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 AFAP1L2Q8N4X5 818 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 TRIM58Q8NG06 486 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 MTFMTQ96DP5 389 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 OR1F2PQ96R84 312 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 FAM167BQ9BTA0 163 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 LRFN1Q9P244 771 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 ITGB1BP2Q9UKP3 347 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 NEU2Q9Y3R4 380 aa17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 INTS1Q8N201 2190 aaKnown RBP17.3■□□□□ 0.36
SSSCA1-206ENST00000531405 DNAJC13O75165 2243 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 CHST10O43529 356 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 ASNA1O43681 348 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 OR1F1O43749 312 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 GALR3O60755 368 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 B4GALT2O60909 372 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 CLDN14O95500 239 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 MLYCDO95822 493 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 SERPIND1P05546 499 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 FHP07954 510 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 ABOP16442 354 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 AGAP20933 346 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 CCND1P24385 295 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 TPP2P29144 1249 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 KIR3DL1P43629 444 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 RGS4P49798 205 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 PGGT1BP53609 377 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 TAS2R50P59544 299 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 SP140Q13342 867 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms