RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 RSPH14Q9UHP6 348 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 SLC39A10Q9ULF5 831 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 USF3Q68DE3 2245 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 A0A1W2PPV9 198 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 OR14I1A6ND48 311 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 OR2W5A6NFC9 320 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 FAM47E-STBD1D6RA91 191 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 H7C0S8 307 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 M0R082 166 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ACOT7O00154 380 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 SYT5O00445 386 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 GNB5O14775 395 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 WDR1O75083 606 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 PHF2O75151 1096 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 IFNA2P01563 188 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 KRT1P04264 644 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 MAPK1P28482 360 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 XCR1P46094 333 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 GEMP55040 296 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 MLF1P58340 268 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 KLHL30Q0D2K2 578 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 MSLNQ13421 630 aaPredicted RBP7.67□□□□□ -1.18
CD44-232ENST00000531118 PTK6Q13882 451 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 FBXL19-AS1Q494R0 122 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 CATSPEREQ5SY80 951 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 LRRC8BQ6P9F7 803 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 PAOXQ6QHF9 649 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 PRSS57Q6UWY2 283 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 PRSS41Q7RTY9 318 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 VSIG1Q86XK7 387 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 SLC13A5Q86YT5 568 aaPredicted RBP7.67□□□□□ -1.18
CD44-232ENST00000531118 RFX6Q8HWS3 928 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 CYP4Z2PQ8N1L4 340 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 OR2A1Q8NGT9 310 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 CFAP61Q8NHU2 1237 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ZNF417Q8TAU3 575 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 LKAAEAR1Q8TD35 194 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ELP5Q8TE02 316 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 TFB1MQ8WVM0 346 aaKnown RBP7.67□□□□□ -1.18
CD44-232ENST00000531118 TSLPQ969D9 159 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ALKBH8Q96BT7 664 aaKnown RBP7.67□□□□□ -1.18
CD44-232ENST00000531118 LRRC46Q96FV0 321 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ZNF587Q96SQ5 575 aaPredicted RBP7.67□□□□□ -1.18
CD44-232ENST00000531118 SECISBP2Q96T21 854 aaKnown RBP7.67□□□□□ -1.18
CD44-232ENST00000531118 PIP5K1AQ99755 562 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 YIPF4Q9BSR8 244 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 DPH7Q9BTV6 452 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 DEFB127Q9H1M4 99 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 GBA3Q9H227 469 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ZDHHC11Q9H8X9 412 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 HCN3Q9P1Z3 774 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 NCKAP5O14513 1909 aa7.67□□□□□ -1.18
CD44-232ENST00000531118 ROS1P08922 2347 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 PINLYPA6NC86 204 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 TUBAL3A6NHL2 446 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 H0YIG0 161 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 FCHO1O14526 889 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 PHF1O43189 567 aaPredicted RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 RGS9O75916 674 aaPredicted RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 NSA2O95478 260 aaKnown RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 IGHG3P01860 377 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 PECAM1P16284 738 aaPredicted RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 ZFXP17010 805 aaPredicted RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 BMP5P22003 454 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 CMPK1P30085 196 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 ADRA1AP35348 466 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 AVPR1BP47901 424 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 DMTNQ08495 405 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 FAM53BQ14153 422 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 ABRAXAS2Q15018 415 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 CT47A1Q5JQC4 288 aaPredicted RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 APTXQ7Z2E3 356 aaKnown RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 OR9A4Q8NGU2 314 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 HMGCLL1Q8TB92 370 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 PERPQ96FX8 193 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 QKIQ96PU8 341 aaKnown RBP eCLIP7.66□□□□□ -1.18
CD44-232ENST00000531118 VAT1Q99536 393 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 DEPPQ9NTK1 212 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 FOXD3Q9UJU5 478 aaPredicted RBP7.66□□□□□ -1.18
CD44-232ENST00000531118 HEATR5AQ86XA9 2040 aa7.66□□□□□ -1.18
CD44-232ENST00000531118 IGKV1-8A0A0C4DH67 115 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 A0A0G2JMM0 328 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 A0A1W2PPB8 328 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 A0A1W2PRS3 328 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 KIR3DP1A8MWS1 328 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 AQP7O14520 342 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 DVL2O14641 736 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 GPC4O75487 556 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 ANXA9O76027 345 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 STATHP02808 62 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 FREM3P0C091 2139 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 OR56A5P0C7T3 313 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 SKILP12757 684 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 NID1P14543 1247 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 IL1RNP18510 177 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 CCR7P32248 378 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 ARHGAP25P42331 645 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 OR4D2P58180 307 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 PPIAP62937 165 aaKnown RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 SORDQ00796 357 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms