RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 S100A3P33764 101 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 NRIP1P48552 1158 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 AP1S2P56377 157 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 CYP4F3Q08477 520 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 SP140Q13342 867 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 DAG1Q14118 895 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 CARTPTQ16568 116 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 CDKL4Q5MAI5 379 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 FRG2Q64ET8 278 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 RAET1GQ6H3X3 334 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 TRAPPC5Q8IUR0 188 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 CFAP206Q8IYR0 622 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 OR2T12Q8NG77 320 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 BPIFB1Q8TDL5 484 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ZNF583Q96ND8 569 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 FRG2BQ96QU4 278 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 NODALQ96S42 347 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 INPP5KQ9BT40 448 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ASPSCR1Q9BZE9 553 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 OR2AG1Q9H205 316 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 SLA2Q9H6Q3 261 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 ABCB10Q9NRK6 738 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 DEC1Q9P2X7 70 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 NEUROG3Q9Y4Z2 214 aa11.15□□□□□ -0.62
USP35-207ENST00000530546 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 RECQL5O94762 991 aaPredicted RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 SLCO2B1O94956 709 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 IL6P05231 212 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 SDC1P18827 310 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 PYCR3Q53H96 274 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 ADNP2Q6IQ32 1131 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 ZNF544Q6NX49 715 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 ZCCHC8Q6NZY4 707 aaKnown RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 AGTRAPQ6RW13 159 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 PROSER1Q86XN7 944 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 MSRB3Q8IXL7 192 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 CHCHD4Q8N4Q1 142 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 CHDHQ8NE62 594 aaPredicted RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 PHOSPHO2Q8TCD6 241 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 WFIKKN2Q8TEU8 576 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 CCM2Q9BSQ5 444 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 BTBD2Q9BX70 525 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 TMEM45AQ9NWC5 275 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 MAGEL2Q9UJ55 1249 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 PCDHB3Q9Y5E6 796 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 SLC16A5O15375 505 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 INMTO95050 263 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 CATP04040 527 aaKnown RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 ALPLP05186 524 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 ANXA6P08133 673 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 GSTM1P09488 218 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 CD22P20273 847 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 EFNA1P20827 205 aaPredicted RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 CEP78Q5JTW2 689 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 RTL10Q7L3V2 364 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 GRAMD2AQ8IUY3 354 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 CCDC103Q8IW40 242 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 NPAS3Q8IXF0 933 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 L3MBTL4Q8NA19 623 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 GLB1L3Q8NCI6 653 aaPredicted RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 OR6F1Q8NGZ6 308 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 NCLNQ969V3 563 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 SLIRPQ9GZT3 109 aaKnown RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 IGFLR1Q9H665 355 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 RAD18Q9NS91 495 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 STOX2Q9P2F5 926 aaPredicted RBP11.14□□□□□ -0.63
USP35-207ENST00000530546 LIMD1Q9UGP4 676 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 PPT2Q9UMR5 302 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 INVSQ9Y283 1065 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 RWDD3Q9Y3V2 267 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 PRKAB1Q9Y478 270 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 MAU2Q9Y6X3 613 aa11.14□□□□□ -0.63
USP35-207ENST00000530546 TBC1D3BA6NDS4 549 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 HEPACAM2A8MVW5 462 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FAM25AB3EWG3 89 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FAM25CB3EWG5 89 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FAM25GB3EWG6 89 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SPINT1O43278 529 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 SLC16A8O95907 504 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PRNPP04156 253 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 IL7RP16871 459 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 GPR1P46091 355 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 MRPS15P82914 257 aaKnown RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 DOC2AQ14183 400 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 OTUD3Q5T2D3 398 aaPredicted RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 DESI1Q6ICB0 168 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 P2RY8Q86VZ1 359 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 FAM86B1Q8N7N1 296 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 LRIG1Q96JA1 1093 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 DEPDC7Q96QD5 511 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 PKP4Q99569 1192 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 STMN3Q9NZ72 180 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 GPRC5BQ9NZH0 403 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 CAB39Q9Y376 341 aaPredicted RBP11.13□□□□□ -0.63
USP35-207ENST00000530546 PCDHB14Q9Y5E9 798 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 ZSCAN5BA6NJL1 495 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 WASP42768 502 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 CDKN2CP42773 168 aa11.13□□□□□ -0.63
USP35-207ENST00000530546 TPD52P55327 224 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms