RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 TAF10Q12962 218 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 GTF2H2Q13888 395 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 DUOXA1Q1HG43 343 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ODF3L2Q3SX64 289 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 USH1GQ495M9 461 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 SLC36A3Q495N2 470 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CCDC152Q4G0S7 254 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 EFHC1Q5JVL4 640 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 NKAIN2Q5VXU1 208 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 OR7E24Q6IFN5 339 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 SLC18B1Q6NT16 456 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 GTF2H2CQ6P1K8 395 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ARHGAP11AQ6P4F7 1023 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CTR9Q6PD62 1173 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CDHR3Q6ZTQ4 885 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ASB18Q6ZVZ8 466 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PTF1AQ7RTS3 328 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 TECPR1Q7Z6L1 1165 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PIP4P1Q86T03 277 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 GRAMD2AQ8IUY3 354 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CNGA4Q8IV77 575 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ZDHHC21Q8IVQ6 265 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 MISPQ8IVT2 679 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 DCP1BQ8IZD4 617 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CENPLQ8N0S6 344 aaPredicted RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PGBD5Q8N414 524 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CERS5Q8N5B7 392 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 LRRC17Q8N6Y2 441 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 TMEM99Q8N816 258 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 EIF1ADQ8N9N8 165 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 SMYD1Q8NB12 490 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ZNF548Q8NEK5 533 aaPredicted RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 OR2T3Q8NH03 318 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CHPT1Q8WUD6 406 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 NCLNQ969V3 563 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ABHD8Q96I13 439 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 THOC3Q96J01 351 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 MAGED4Q96JG8 741 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 NEURL2Q9BR09 285 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CBWD1Q9BRT8 395 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 TRAF4Q9BUZ4 470 aaPredicted RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 LRRC2Q9BYS8 371 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PANK2Q9BZ23 570 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 NACAP1Q9BZK3 213 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 PRSS22Q9GZN4 317 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 EBF3Q9H4W6 596 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ACTR8Q9H981 624 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 MARCH7Q9H992 704 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 COG4Q9H9E3 785 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 YAE1D1Q9NRH1 226 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 DDX28Q9NUL7 540 aaKnown RBP3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 NMRK1Q9NWW6 199 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CHRNA9Q9UGM1 479 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 CHMP2BQ9UQN3 213 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 ERVK-19Q9WJR5 959 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 OR2W1Q9Y3N9 320 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 HMGXB3Q12766 1538 aa3.27□□□□□ -1.89
AMBRA1-208ENST00000529558 NESP48681 1621 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 NPC1L1Q9UHC9 1359 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 C15orf38-AP3S2A0A0A6YYH1 394 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 A0A0U1RQV5 110 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 A0A1B0GVT2 93 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 RPS10-NUDT3A0A1W2PQS6 291 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 EME2A4GXA9 379 aaPredicted RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 INAFM1C9JVW0 142 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 H3BMM5 538 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 SGK1O00141 431 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 CCL24O00175 119 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 CHEK1O14757 476 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 XPO1O14980 1071 aaKnown RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 CHUKO15111 745 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 SYT7O43581 403 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 TOM1L1O75674 476 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 RHOBTB1O94844 696 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 MFN2O95140 757 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 ADCY5O95622 1261 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 CPNE6O95741 557 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 APOHP02749 345 aaPredicted RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 SERPINF2P08697 491 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 RRASP10301 218 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 GP1BBP13224 206 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 CEACAM1P13688 526 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 ZNF23P17027 643 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 TNNI3P19429 210 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 GDI1P31150 447 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 HOXD3P31249 432 aaPredicted RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 FCGR2BP31994 310 aaPredicted RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 OR1D2P34982 312 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 TAGLN2P37802 199 aaKnown RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 OR3A3P47888 321 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 RFX2P48378 723 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 MAZP56270 477 aaKnown RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 HERV-K104P63124 156 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 EEF1A1P68104 462 aaKnown RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 ABATP80404 500 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 GABPAQ06546 454 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 TRAP1Q12931 704 aaKnown RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 MFAP5Q13361 173 aa3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 RFTN1Q14699 578 aaPredicted RBP3.26□□□□□ -1.89
AMBRA1-208ENST00000529558 ANKRD55Q3KP44 614 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms