RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 METTL27Q8N6F8 245 aaPredicted RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 CSNK1A1LQ8N752 337 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PPFIBP2Q8ND30 876 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PHF10Q8WUB8 498 aaKnown RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 ANP32BQ92688 251 aaKnown RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PDLIM2Q96JY6 352 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 CABS1Q96KC9 395 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 GPR137Q96N19 417 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 FOXC2Q99958 501 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 FAM129AQ9BZQ8 928 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PLAC1Q9HBJ0 212 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 STMN3Q9NZ72 180 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 STOX2Q9P2F5 926 aaPredicted RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PDE10AQ9Y233 779 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 RUVBL1Q9Y265 456 aaKnown RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 VWA7Q9Y334 891 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 TEX264Q9Y6I9 313 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 MAU2Q9Y6X3 613 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 CPAMD8Q8IZJ3 1885 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 TMEM200CA6NKL6 621 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 USP27XA6NNY8 438 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 E9PLN8 166 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 H7BY64 318 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 NDC80O14777 642 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 FOXS1O43638 330 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 TSPAN12O95859 305 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 CYC1P08574 325 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 HIST1H2AGP0C0S8 130 aaPredicted RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 KLK2P20151 261 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 HIST1H2ADP20671 130 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 FBLP22087 321 aaKnown RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 DNAJA1P31689 397 aaKnown RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 ELK3P41970 407 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 PAFAH1B1P43034 410 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 EMP2P54851 167 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 CDKN2DP55273 166 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 IL2P60568 153 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 RPS15AP62244 130 aaKnown RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 PMP22Q01453 160 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 ALDH6A1Q02252 535 aaKnown RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 ZNF33BQ06732 778 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 ILF2Q12905 390 aaKnown RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 TSTA3Q13630 321 aaPredicted RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 NDUFA9Q16795 377 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 BBS9Q3SYG4 887 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 THEMIS2Q5TEJ8 643 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 MYO1HQ8N1T3 1032 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 DTWD1Q8N5C7 304 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 AMER3Q8N944 861 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 AGAP11Q8TF27 550 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 SDCCAG3Q96C92 435 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 TM4SF19Q96DZ7 209 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 PDLIM5Q96HC4 596 aaKnown RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 HIST1H2AHQ96KK5 128 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 PRAP1Q96NZ9 151 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 NDNQ99608 321 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 NAPGQ99747 312 aaPredicted RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 HIST1H2AJQ99878 128 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 VKORC1Q9BQB6 163 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 ZNF559Q9BR84 538 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 MESP1Q9BRJ9 268 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 H2AFJQ9BTM1 129 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 SYNPO2LQ9H987 977 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 MKKSQ9NPJ1 570 aaPredicted RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
CPSF1-203ENST00000527916 C14orf105Q9NVL8 296 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 TNFRSF10DQ9UBN6 386 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 ADAMTS6Q9UKP5 1117 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 PPT2Q9UMR5 302 aa9.94□□□□□ -0.82
CPSF1-203ENST00000527916 NSD1Q96L73 2696 aaPredicted RBP9.93□□□□□ -0.82
CPSF1-203ENST00000527916 IGHV1-45A0A0A0MS14 117 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 IDSB3KWA1 339 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 E7ESA3 106 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 NPIPA5E9PKD4 350 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 H0YIG0 161 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 PRRG2O14669 202 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 HAT1O14929 419 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 TP73O15350 636 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 BANF1O75531 89 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 SEC31AO94979 1220 aaKnown RBP9.93□□□□□ -0.82
CPSF1-203ENST00000527916 FOSL1P15407 271 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 IST1P53990 364 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 AP1S2P56377 157 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 ARL4CP56559 192 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 FOLH1Q04609 750 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 EEF1A2Q05639 463 aaKnown RBP9.93□□□□□ -0.82
CPSF1-203ENST00000527916 HKDC1Q2TB90 917 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 RBM20Q5T481 1227 aaKnown RBP9.93□□□□□ -0.82
CPSF1-203ENST00000527916 CES4AQ5XG92 561 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 FAM45BPQ6NSW5 357 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 AGTRAPQ6RW13 159 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 LCTLQ6UWM7 567 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 KLHL7Q8IXQ5 586 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 FAM45AQ8TCE6 357 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 ANKRD7Q92527 254 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 NINJ1Q92982 152 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 MMABQ96EY8 250 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms