RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ZNF860A6NHJ4 632 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 MAGEB17A8MXT2 336 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 EIF3FO00303 357 aaPredicted RBP22.15■■□□□ 1.14
CPSF1-202ENST00000527827 SLC26A5P58743 744 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 OC90Q02509 493 aaPredicted RBP22.15■■□□□ 1.14
CPSF1-202ENST00000527827 ACTN3Q08043 901 aaPredicted RBP22.15■■□□□ 1.14
CPSF1-202ENST00000527827 ZNF468Q5VIY5 522 aaPredicted RBP22.15■■□□□ 1.14
CPSF1-202ENST00000527827 SLC25A25Q6KCM7 469 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 CAPN13Q6MZZ7 669 aaPredicted RBP22.15■■□□□ 1.14
CPSF1-202ENST00000527827 MBOAT1Q6ZNC8 495 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 C17orf64Q86WR6 236 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 LGI4Q8N135 537 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 OR5T3Q8NGG3 340 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 OR1F2PQ96R84 312 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 ATG10Q9H0Y0 220 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 CDCP1Q9H5V8 836 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 GPAMQ9HCL2 828 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 COMMD10Q9Y6G5 202 aa22.15■■□□□ 1.14
CPSF1-202ENST00000527827 SDR42E2A6NKP2 422 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 HAUS5O94927 633 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 CDH1P12830 882 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 MLNP12872 115 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 IL10P22301 178 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 OR4D2P58180 307 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 MPP1Q00013 466 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 HSF1Q00613 529 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 TIAL1Q01085 375 aaKnown RBP eCLIP22.14■■□□□ 1.13
CPSF1-202ENST00000527827 RNFT1Q5M7Z0 435 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 AGTRAPQ6RW13 159 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 AGGF1Q8N302 714 aaeCLIP22.14■■□□□ 1.13
CPSF1-202ENST00000527827 HORMAD2Q8N7B1 307 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 MFSD9Q8NBP5 474 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 ELP5Q8TE02 316 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 AGAP11Q8TF27 550 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 AARSD1Q9BTE6 412 aaKnown RBP22.14■■□□□ 1.13
CPSF1-202ENST00000527827 SGPP1Q9BX95 441 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 FAM129AQ9BZQ8 928 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 HOMER3Q9NSC5 361 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 LRFN1Q9P244 771 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 FBXO5Q9UKT4 447 aa22.14■■□□□ 1.13
CPSF1-202ENST00000527827 CEP104O60308 925 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 DNAJB6O75190 326 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 ABOP16442 354 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 TAS2R50P59544 299 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 NAE1Q13564 534 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 LCTLQ6UWM7 567 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 RPS19BP1Q86WX3 136 aaKnown RBP22.13■■□□□ 1.13
CPSF1-202ENST00000527827 ZNF227Q86WZ6 799 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 DOLPP1Q86YN1 238 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 GHDCQ8N2G8 530 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 KIF2BQ8N4N8 673 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 AFAP1L2Q8N4X5 818 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 FAM98AQ8NCA5 519 aaKnown RBP22.13■■□□□ 1.13
CPSF1-202ENST00000527827 EEF1AKMT1Q8WVE0 214 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 C14orf79Q96F83 325 aa22.13■■□□□ 1.13
CPSF1-202ENST00000527827 C20orf96Q9NUD7 363 aaPredicted RBP22.13■■□□□ 1.13
CPSF1-202ENST00000527827 ADAM10O14672 748 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 NDC80O14777 642 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 KRT14P02533 472 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 FHP07954 510 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 SLC35G6P0C7Q6 338 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 NPPBP16860 134 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 CDC25BP30305 580 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 MAPKAPK3Q16644 382 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 FGD2Q7Z6J4 655 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 GAS2L3Q86XJ1 694 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 LMNTD2Q8IXW0 634 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 ACBD4Q8NC06 268 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 MCUQ8NE86 351 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 PHF10Q8WUB8 498 aaKnown RBP22.12■■□□□ 1.13
CPSF1-202ENST00000527827 ALKBH8Q96BT7 664 aaKnown RBP22.12■■□□□ 1.13
CPSF1-202ENST00000527827 SERPINB12Q96P63 405 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 DMRTA2Q96SC8 542 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 SPOCK3Q9BQ16 436 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 PARVBQ9HBI1 364 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 XAB2Q9HCS7 855 aaKnown RBP22.12■■□□□ 1.13
CPSF1-202ENST00000527827 ASB1Q9Y576 335 aa22.12■■□□□ 1.13
CPSF1-202ENST00000527827 SETD2Q9BYW2 2564 aaPredicted RBP22.12■■□□□ 1.13
CPSF1-202ENST00000527827 GOLGA8MH3BSY2 632 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 CDK2AP1O14519 115 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 NME2P1O60361 137 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 GALR3O60755 368 aaPredicted RBP22.11■■□□□ 1.13
CPSF1-202ENST00000527827 SLC25A12O75746 678 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 C8GP07360 202 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 NME2P22392 152 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 TPP2P29144 1249 aaPredicted RBP22.11■■□□□ 1.13
CPSF1-202ENST00000527827 CXCR5P32302 372 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 GRK3P35626 688 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 MAGEA3P43357 314 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 HERC3Q15034 1050 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 TESK1Q15569 626 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 TTC27Q6P3X3 843 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 C3P1Q6ZMU1 363 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 CEP97Q8IW35 865 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 CPSF7Q8N684 471 aaKnown RBP22.11■■□□□ 1.13
CPSF1-202ENST00000527827 ZNF740Q8NDX6 193 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 TBC1D20Q96BZ9 403 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 OLFM1Q99784 485 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 SARGQ9BW04 601 aa22.11■■□□□ 1.13
CPSF1-202ENST00000527827 ENKD1Q9H0I2 346 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms