RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 TCFL5Q9UL49 500 aa20.05■□□□□ 0.8
PKP3-205ENST00000527442 G3BP2Q9UN86 482 aaKnown RBP20.05■□□□□ 0.8
PKP3-205ENST00000527442 TDRKHQ9Y2W6 561 aaKnown RBP20.05■□□□□ 0.8
PKP3-205ENST00000527442 ASB1Q9Y576 335 aa20.05■□□□□ 0.8
PKP3-205ENST00000527442 TMEM114B3SHH9 223 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 MEN1O00255 615 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 E2F3O00716 465 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 ZBTB11O95625 1053 aaPredicted RBP20.04■□□□□ 0.8
PKP3-205ENST00000527442 KLK3P07288 261 aaPredicted RBP20.04■□□□□ 0.8
PKP3-205ENST00000527442 CAPN1P07384 714 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 RAB40ALP0C0E4 278 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 VARSP26640 1264 aaKnown RBP20.04■□□□□ 0.8
PKP3-205ENST00000527442 HSPA7P48741 367 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 PNLIPRP1P54315 467 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 BST1Q10588 318 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 RAPSNQ13702 412 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 C18orf21Q32NC0 220 aaPredicted RBP20.04■□□□□ 0.8
PKP3-205ENST00000527442 TUBB8Q3ZCM7 444 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 UNC50Q53HI1 259 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 CES4AQ5XG92 561 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 FAM198BQ6UWH4 519 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 FRMD7Q6ZUT3 714 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 OOSP2Q86WS3 158 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 TICAM1Q8IUC6 712 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 OR8K5Q8NH50 307 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 PPP1R14CQ8TAE6 165 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 SNRNP40Q96DI7 357 aaKnown RBP20.04■□□□□ 0.8
PKP3-205ENST00000527442 TRMOQ9BU70 441 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 CAPS2Q9BXY5 557 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 NLNQ9BYT8 704 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 GSTO2Q9H4Y5 243 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 ASF1BQ9NVP2 202 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 SOHLH2Q9NX45 425 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 CIDEBQ9UHD4 219 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 ICKQ9UPZ9 632 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 BTRCQ9Y297 605 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 FER1L5A0AVI2 2057 aa20.04■□□□□ 0.8
PKP3-205ENST00000527442 LRRC14BA6NHZ5 514 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 E7ENX8 843 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 SNNO75324 88 aaPredicted RBP20.03■□□□□ 0.8
PKP3-205ENST00000527442 STK16O75716 305 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 CBX6O95503 412 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 SHMT2P34897 504 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 RORAP35398 523 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 PIK3CGP48736 1102 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 TBPL1P62380 186 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 TAP2Q03519 686 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 GALNT1Q10472 559 aaPredicted RBP20.03■□□□□ 0.8
PKP3-205ENST00000527442 STX3Q13277 289 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 ATP1A4Q13733 1029 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 RCN2Q14257 317 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 PTCHD3Q3KNS1 767 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 OR2L8Q8NGY9 312 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 ESAMQ96AP7 390 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 CNDP1Q96KN2 507 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 SMAD5Q99717 465 aaKnown RBP20.03■□□□□ 0.8
PKP3-205ENST00000527442 SGPP1Q9BX95 441 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 DRC3Q9H069 523 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 OPTCQ9UBM4 332 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 PLAGL1Q9UM63 463 aa20.03■□□□□ 0.8
PKP3-205ENST00000527442 CROCCQ5TZA2 2017 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 OR6C74A6NCV1 312 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 K7EPI3 171 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 SUPT7LO94864 414 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 SNUPNO95149 360 aaKnown RBP20.02■□□□□ 0.8
PKP3-205ENST00000527442 CCND1P24385 295 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 PLEKHN1Q494U1 663 aaPredicted RBP20.02■□□□□ 0.8
PKP3-205ENST00000527442 FBXO48Q5FWF7 155 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 CFAP157Q5JU67 520 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 TMTC4Q5T4D3 741 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 MED25Q71SY5 747 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 SYTL1Q8IYJ3 562 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 CCNYL1Q8N7R7 359 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 TMEM102Q8N9M5 508 aaPredicted RBP20.02■□□□□ 0.8
PKP3-205ENST00000527442 CLIP3Q96DZ5 547 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 IL17FQ96PD4 163 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 PITPNM3Q9BZ71 974 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 ATG10Q9H0Y0 220 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 ADAM21Q9UKJ8 722 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 SLC5A6Q9Y289 635 aa20.02■□□□□ 0.8
PKP3-205ENST00000527442 CCDC88CQ9P219 2028 aa20.02■□□□□ 0.79
PKP3-205ENST00000527442 WDR47O94967 919 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 ABCE1P61221 599 aaKnown RBP20.01■□□□□ 0.79
PKP3-205ENST00000527442 NAE1Q13564 534 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 TTC19Q6DKK2 380 aaPredicted RBP20.01■□□□□ 0.79
PKP3-205ENST00000527442 CAPN13Q6MZZ7 669 aaPredicted RBP20.01■□□□□ 0.79
PKP3-205ENST00000527442 CISD2Q8N5K1 135 aaKnown RBP20.01■□□□□ 0.79
PKP3-205ENST00000527442 LINC01555Q8NAE3 123 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 SMPDL3AQ92484 453 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 C5orf34Q96MH7 638 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 CCDC177Q9NQR7 707 aaPredicted RBP20.01■□□□□ 0.79
PKP3-205ENST00000527442 DNAJC11Q9NVH1 559 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 THAP1Q9NVV9 213 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 OR6C2Q9NZP2 312 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 STK38LQ9Y2H1 464 aa20.01■□□□□ 0.79
PKP3-205ENST00000527442 CCNT2O60583 730 aaKnown RBP20■□□□□ 0.79
PKP3-205ENST00000527442 SHOX2O60902 331 aaPredicted RBP20■□□□□ 0.79
PKP3-205ENST00000527442 ARRB2P32121 409 aa20■□□□□ 0.79
PKP3-205ENST00000527442 LSP1P33241 339 aa20■□□□□ 0.79
PKP3-205ENST00000527442 GDF5P43026 501 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms