RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ALDH9A1P49189 494 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CASP4P49662 377 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MTHFSP49914 203 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SERPINB9P50453 376 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CCR9P51686 369 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 CASP9P55211 416 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DEFA1P59665 94 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DEFA3P59666 94 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 EIF3EP60228 445 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ABCE1P61221 599 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ASIC1P78348 528 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 STX4Q12846 297 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 LMAN2Q12907 356 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 NME3Q13232 169 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF177Q13360 481 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 BTN1A1Q13410 526 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DDX39BQ13838 428 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 BMPR2Q13873 1038 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 GRB7Q14451 532 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 STAT4Q14765 748 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 VEPH1Q14D04 833 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ACOX1Q15067 660 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DHCR24Q15392 516 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 HIST2H2ACQ16777 129 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PPP1R3AQ16821 1122 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 EXOC3L4Q17RC7 722 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TWISTNBQ3B726 338 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC39A12Q504Y0 691 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 KLHL26Q53HC5 615 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PABPC1L2AQ5JQF8 200 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 IRAK1BP1Q5VVH5 260 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 LRRC66Q68CR7 880 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TCEAL6Q6IPX3 200 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 RRAGAQ7L523 313 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SNX20Q7Z614 316 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TRABD2AQ86V40 505 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 COMMD7Q86VX2 200 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 METTL23Q86XA0 190 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 KRT78Q8N1N4 520 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 THEM5Q8N1Q8 247 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PACRGLQ8N7B6 248 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF321PQ8N8H1 164 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 POC5Q8NA72 575 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DENND6BQ8NEG7 585 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 OR1M1Q8NGA1 313 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 OR9A1PQ8NGU1 263 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC30A5Q8TAD4 765 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 NANPQ8TBE9 248 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SETD6Q8TBK2 473 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 FBXO25Q8TCJ0 367 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ELP5Q8TE02 316 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TAS1R2Q8TE23 839 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DTD1Q8TEA8 209 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM216AQ8WUB2 273 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DEDD2Q8WXF8 326 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC7A6Q92536 515 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 HTRA1Q92743 480 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 RBPMSQ93062 196 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ART4Q93070 314 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 EXOSC8Q96B26 276 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PPWD1Q96BP3 646 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 PTERQ96BW5 349 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 DCPSQ96C86 337 aaKnown RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TMEM41AQ96HV5 264 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 C10orf90Q96M02 699 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 KCNK16Q96T55 309 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 IL12RB2Q99665 862 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SSX3Q99909 188 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 VRK1Q99986 396 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ADPGKQ9BRR6 497 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 C2orf88Q9BSF0 95 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TBCDQ9BTW9 1192 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MED18Q9BUE0 208 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MND1Q9BWT6 205 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 LRRC2Q9BYS8 371 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 GPR63Q9BZJ6 419 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 UCK2Q9BZX2 261 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TRIM2Q9C040 744 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ROGDIQ9GZN7 287 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 WWP1Q9H0M0 922 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 METTL9Q9H1A3 318 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 POLR1BQ9H9Y6 1135 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MLXIPLQ9NP71 852 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MYOZ1Q9NP98 299 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 SLCO1B3Q9NPD5 702 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 NRIP3Q9NQ35 241 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 EQTNQ9NQ60 294 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 AGPAT3Q9NRZ7 376 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 RASSF1Q9NS23 344 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM207AQ9NSI2 230 aaPredicted RBP3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ERAP1Q9NZ08 941 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 TREM2Q9NZC2 230 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 GRHL1Q9NZI5 618 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 COQ3Q9NZJ6 369 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF224Q9NZL3 707 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 MORF4L1Q9UBU8 362 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 KLHL21Q9UJP4 597 aa3.58□□□□□ -1.84
CLNS1A-209ENST00000527299 FBXO5Q9UKT4 447 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms