RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 FAM199XQ6PEV8 388 aaPredicted RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 KLHL35Q6PF15 583 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 COX15Q7KZN9 410 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 MILR1Q7Z6M3 343 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CROCCP2Q86T23 111 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CUZD1Q86UP6 607 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZFAND4Q86XD8 727 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 PDSS2Q86YH6 399 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SLC22A9Q8IVM8 553 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZNF655Q8N720 491 aaPredicted RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 ZNF781Q8N8C0 355 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 MFSD9Q8NBP5 474 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 OR7G3Q8NG95 312 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 OR2T11Q8NH01 316 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZNF473Q8WTR7 871 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 NUDT8Q8WV74 236 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CKAP2Q8WWK9 683 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZUFSPQ96AP4 578 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SLC22A18Q96BI1 424 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TCTN2Q96GX1 697 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 C3orf30Q96M34 536 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TMEM74Q96NL1 305 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 DEPDC7Q96QD5 511 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 F2RL3Q96RI0 385 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZNF382Q96SR6 550 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZFYVE21Q9BQ24 234 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 HAUS8Q9BT25 410 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 NTMT1Q9BV86 223 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZNF717Q9BY31 904 aaPredicted RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 DRC3Q9H069 523 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 IQCGQ9H095 443 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 OR51B5Q9H339 312 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 PDE7BQ9NP56 450 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 MID1IP1Q9NPA3 183 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ASCL3Q9NQ33 180 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SLC39A1Q9NY26 324 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 GPRC5BQ9NZH0 403 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 DHCR7Q9UBM7 475 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 SNX7Q9UNH6 387 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 RUVBL1Q9Y265 456 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 FIS1Q9Y3D6 152 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CCL27Q9Y4X3 112 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ANGPTL3Q9Y5C1 460 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 KCNE2Q9Y6J6 123 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SDK2Q58EX2 2172 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SCN3AQ9NY46 2000 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SEC16AO15027 2179 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ATRXP46100 2492 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 KMT2BQ9UMN6 2715 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 AHCTF1Q8WYP5 2266 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CCDC187A0A096LP49 1063 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ARHGAP10A1A4S6 786 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ZNF860A6NHJ4 632 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 WASHC1A8K0Z3 465 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 MAGEB17A8MXT2 336 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 MATN2O00339 956 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ZNF195O14628 629 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 BIRC5O15392 142 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ZNF749O43361 778 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TLX3O43711 291 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 NPHS1O60500 1241 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 SNNO75324 88 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 KIAA0754O94854 1291 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TNFSF15O95150 251 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CLDN9O95484 217 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ESRRBO95718 433 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 PDYNP01213 254 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CAPNS1P04632 268 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 SERPIND1P05546 499 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ADRB1P08588 477 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 SMIM10L1P0DMW3 83 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 PCNAP12004 261 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 FGF5P12034 268 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 BMP2P12643 396 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CD1EP15812 388 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 GNAZP19086 355 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 WT1P19544 449 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 F8A1P23610 371 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CCND1P24385 295 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CSTF2P33240 577 aaKnown RBP eCLIP6.17□□□□□ -1.42
CD44-214ENST00000525211 SLC1A6P48664 564 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 RAB8AP61006 207 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ABCE1P61221 599 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 GABREP78334 506 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 OLR1P78380 273 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 MAT1AQ00266 395 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 HMGCS1Q01581 520 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 GUCY1A3Q02108 690 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 LCP2Q13094 533 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 GPS2Q13227 327 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TUBB3Q13509 450 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 DDX39BQ13838 428 aaKnown RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 ABRAXAS2Q15018 415 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TBCCQ15814 346 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 CLPPQ16740 277 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 C4orf17Q53FE4 359 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 TOR1AIP1Q5JTV8 583 aa6.17□□□□□ -1.42
CD44-214ENST00000525211 ZNF385CQ66K41 422 aaPredicted RBP6.17□□□□□ -1.42
CD44-214ENST00000525211 MRPL14Q6P1L8 145 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms