RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CYP27B1O15528 508 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 TLX3O43711 291 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 NOBOXO60393 691 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ACSL4O60488 711 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 B4GALT4O60513 344 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 BCAS1O75363 584 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 UPK3AO75631 287 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PROS1P07225 676 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CSN3P07498 182 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NR2F6P10588 404 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NMBRP28336 390 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PRDX2P32119 198 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 SLC8A1P32418 973 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 HSD17B3P37058 310 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PTGFRP43088 359 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 OR3A1P47881 315 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 LHX1P48742 406 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 SLC26A2P50443 739 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CCNG1P51959 295 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 C21orf59P57076 290 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 RAE1P78406 368 aaKnown RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 CDK3Q00526 305 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 SORDQ00796 357 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PRKCQQ04759 706 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 KDSRQ06136 332 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PMPCAQ10713 525 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NAE1Q13564 534 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NR1I3Q14994 352 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ZNF568Q3ZCX4 644 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 BEX5Q5H9J7 111 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 TSTD2Q5T7W7 516 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 IL23RQ5VWK5 629 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NIPAL3Q6P499 406 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 BLOC1S2Q6QNY1 142 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 BTNL8Q6UX41 500 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 COPS6Q7L5N1 327 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 BHLHA15Q7RTS1 189 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 C16orf62Q7Z3J2 963 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NLRX1Q86UT6 975 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 XYLT1Q86Y38 959 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CDKL3Q8IVW4 592 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 CCDC36Q8IYA8 594 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ZNF683Q8IZ20 524 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ADGRF4Q8IZF3 695 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 APCDD1Q8J025 514 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CADM3Q8N126 398 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 FAM58AQ8N1B3 248 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 GALNT16Q8N428 558 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PNPLA1Q8N8W4 532 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 OR4C5Q8NGB2 326 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 KCNG3Q8TAE7 436 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 REPS1Q96D71 796 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CHMP6Q96FZ7 201 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 TEFMQ96QE5 360 aaKnown RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 CCNL2Q96S94 520 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 PNKPQ96T60 521 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ACOX2Q99424 681 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 SLC29A1Q99808 456 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 TSG101Q99816 390 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CINPQ9BW66 212 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 SHCBP1LQ9BZQ2 653 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ROPN1BQ9BZX4 212 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 WWP1Q9H0M0 922 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 MTIF3Q9H2K0 278 aaKnown RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 DPEP3Q9H4B8 488 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 GOLGA2P5Q9HBQ8 144 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ZNF160Q9HCG1 818 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 DNAJC4Q9NNZ3 241 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 MRPL17Q9NRX2 175 aaKnown RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 GPR173Q9NS66 373 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 HIF1ANQ9NWT6 349 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ANKRD10Q9NXR5 420 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 DPP3Q9NY33 737 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 COPS7AQ9UBW8 275 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PISDQ9UG56 409 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ERRFI1Q9UJM3 462 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 CA5BQ9Y2D0 317 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 RHBDD3Q9Y3P4 386 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 SRPRBQ9Y5M8 271 aaKnown RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 KLF2Q9Y5W3 355 aaPredicted RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 PTPRTO14522 1441 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 INSRP06213 1382 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.26□□□□□ -1.73
CD44-213ENST00000525209 TMEM265A0A087WTH1 108 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 A0A1B0GUH1 482 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 DRGXA6NNA5 263 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 HEPACAM2A8MVW5 462 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 PPIAL4DF5H284 164 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 SETD1AO15047 1707 aaKnown RBP4.25□□□□□ -1.73
CD44-213ENST00000525209 YY2O15391 372 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 HOXA3O43365 443 aaPredicted RBP4.25□□□□□ -1.73
CD44-213ENST00000525209 PMPCBO75439 489 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 ATP5HO75947 161 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 CNTN5O94779 1100 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 TOP3BO95985 862 aaKnown RBP4.25□□□□□ -1.73
CD44-213ENST00000525209 ERBB2P04626 1255 aa4.25□□□□□ -1.73
CD44-213ENST00000525209 MCF2P10911 925 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms