RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TMEM120BA0PK00 339 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CDC14CA4D256 554 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ANKDD1BA6NHY2 528 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 GOLGA6L10A6NI86 522 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 WASHC1A8K0Z3 465 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 MAGEB17A8MXT2 336 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 STX16-NPEPL1H3BU86 382 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 STX16O14662 325 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 DSCR3O14972 297 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 RRP8O43159 456 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PRPF4O43172 522 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ERI3O43414 337 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ITM2AO43736 263 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 SRPX2O60687 465 aaPredicted RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PRKRAO75569 313 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 WFS1O76024 890 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 KLHL18O94889 574 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CLDN9O95484 217 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PDYNP01213 254 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 KLK3P07288 261 aaPredicted RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CAPN1P07384 714 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC35G6P0C7Q6 338 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CCNYL3P0C7X3 344 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 LIPCP11150 499 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 NEFHP12036 1026 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 IMPDH1P20839 514 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 BGNP21810 368 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 FBLP22087 321 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 HRH2P25021 359 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CERS1P27544 350 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 OTX2P32243 289 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 RORAP35398 523 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 STAT5AP42229 794 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ST13P50502 369 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 EFNA3P52797 238 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 WDR4P57081 412 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CXADRP78310 365 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 DCDP81605 110 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 HMGCS1Q01581 520 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TLE3Q04726 772 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 BTKQ06187 659 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ABHD18Q0P651 414 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 SF3A3Q12874 501 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CHAF1BQ13112 559 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 DNASE1L3Q13609 305 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CHI3L2Q15782 390 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 COL28A1Q2UY09 1125 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 NKAIN1Q4KMZ8 207 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TNFAIP8L3Q5GJ75 292 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TCTE1Q5JU00 501 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CFAP157Q5JU67 520 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CDKL4Q5MAI5 379 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 MANEAQ5SRI9 462 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 MFSD4BQ5TF39 518 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF385CQ66K41 422 aaPredicted RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 GRHL2Q6ISB3 625 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 RHBDD2Q6NTF9 364 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM214Q6NUQ4 689 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 MED27Q6P2C8 311 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TLDC1Q6P9B6 456 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 IGF2-ASQ6U949 168 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM198BQ6UWH4 519 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 LRRC69Q6ZNQ3 347 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 UBE3DQ7Z6J8 389 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 LAPTM4BQ86VI4 370 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 DSELQ8IZU8 1212 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CARFQ8N187 725 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 KRT78Q8N1N4 520 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ARHGEF39Q8N4T4 335 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ESX1Q8N693 406 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM47BQ8NA70 645 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 CAMKVQ8NCB2 501 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF248Q8NDW4 579 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 OR7G3Q8NG95 312 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 OR8K5Q8NH50 307 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 SNIP1Q8TAD8 396 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PPP1R14CQ8TAE6 165 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 DOK4Q8TEW6 326 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 C8orf44Q96CB5 159 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TLCD1Q96CP7 247 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TM4SF19Q96DZ7 209 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PGM2Q96G03 612 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 PEX11GQ96HA9 241 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF285Q96NJ3 590 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 GBP5Q96PP8 586 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TEFMQ96QE5 360 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 C17orf62Q9BQA9 187 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZPBPQ9BS86 351 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 DRC3Q9H069 523 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ACTL8Q9H568 366 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF304Q9HCX3 659 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 MID1IP1Q9NPA3 183 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 OXSMQ9NWU1 459 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 GPRC5BQ9NZH0 403 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 TRPC4Q9UBN4 977 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 GIMAP2Q9UG22 337 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 GPN3Q9UHW5 284 aaPredicted RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZFP69BQ9UJL9 534 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms