RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TBC1D31Q96DN5 1066 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ERLEC1Q96DZ1 483 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TMA16Q96EY4 203 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 WBP1Q96G27 269 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM41AQ96HV5 264 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CELF6Q96J87 481 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 MS4A14Q96JA4 679 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 RPRD1AQ96P16 312 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 OLFM3Q96PB7 478 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 RNF157Q96PX1 679 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ACOX2Q99424 681 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SLC25A33Q9BSK2 321 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 RTKNQ9BST9 563 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TRIM62Q9BVG3 475 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 BBS2Q9BXC9 721 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CADM1Q9BY67 442 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TSGA10Q9BZW7 698 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ZYG11BQ9C0D3 744 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SLC39A8Q9C0K1 460 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 LRRC19Q9H756 370 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 C10orf88Q9H8K7 445 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 PDFQ9HBH1 243 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 LTB4R2Q9NPC1 389 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TRPV5Q9NQA5 729 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ABCB8Q9NUT2 735 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 OCIAD1Q9NX40 245 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 DLGAP2Q9P1A6 1054 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 GGA2Q9UJY4 613 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NDRG2Q9UN36 371 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 C19orf53Q9UNZ5 99 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF510Q9Y2H8 683 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 R3HDM2Q9Y2K5 976 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 PIAS3Q9Y6X2 628 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ANKRD12Q6UB98 2062 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CEP250Q9BV73 2442 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SPTBN2O15020 2390 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TENM4Q6N022 2769 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 GVINP1Q7Z2Y8 2422 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 KANSL1LA0AUZ9 987 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 LRRD1A4D1F6 860 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 H0Y626 953 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 K7ERQ8 282 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SGK1O00141 431 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SLC9A3R1O14745 358 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ZSCAN12O43309 604 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DCXO43602 365 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ITM2AO43736 263 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 CST8O60676 142 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 CLDN11O75508 207 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 IPO7O95373 1038 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DCNP07585 359 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RHOCP08134 193 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 F7P08709 466 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 KRT7P08729 469 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SLC2A3P11169 496 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SRCP12931 536 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 HLA-EP13747 358 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TCEA1P23193 301 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 OR1E1P30953 314 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DEKP35659 375 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 EIF2DP41214 584 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RGRP47804 291 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 HCAR3P49019 387 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PAPOLAP51003 745 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 METAP1P53582 386 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 AIF1P55008 147 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 HILS1P60008 231 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DYNLT1P63172 113 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SIGLEC14Q08ET2 396 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SLC10A7Q0GE19 358 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 GRSF1Q12849 480 aaKnown RBP eCLIP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ZBTB17Q13105 803 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ENPP2Q13822 863 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PTK2BQ14289 1009 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF234Q14588 700 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PDK2Q15119 407 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PDGFRLQ15198 375 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 HADHQ16836 314 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 GALNTL6Q49A17 601 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 BOLA3Q53S33 107 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TFDP3Q5H9I0 405 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RABGAP1LQ5R372 815 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 MPP7Q5T2T1 576 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 LRRC38Q5VT99 294 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM268Q5VZI3 342 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 ATG9BQ674R7 924 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 DGAT2L7PQ6IED9 249 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RWDD4Q6NW29 188 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 C1orf228Q6PIY5 440 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 LINGO4Q6UY18 593 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SYT10Q6XYQ8 523 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PEX26Q7Z412 305 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RNF144BQ7Z419 303 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PRUNE1Q86TP1 453 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SETD3Q86TU7 594 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RALGPS2Q86X27 583 aaPredicted RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 PSTKQ8IV42 348 aaKnown RBP2.91□□□□□ -1.94
CSDE1-208ENST00000524652 SYCE1Q8N0S2 351 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 RBFAQ8N0V3 343 aa2.91□□□□□ -1.94
CSDE1-208ENST00000524652 UMODL1-AS1Q8N2C9 162 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms