RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZZEF1O43149 2961 aa11.93□□□□□ -0.5
VEGFA-225ENST00000523950 A0A0A6YYC8 382 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 I3L1I5 382 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 CLEC3AO75596 197 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 WFS1O76024 890 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 CYC1P08574 325 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 KRT15P19012 456 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 IL10P22301 178 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 HNF4AP41235 474 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 AGTR2P50052 363 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 STXBP1P61764 594 aaKnown RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 NFKB2Q00653 900 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 IFFO1Q0D2I5 559 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 CHIT1Q13231 466 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 IL10RAQ13651 578 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 DOC2AQ14183 400 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 LIPJQ5W064 366 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 GRHL2Q6ISB3 625 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 APLFQ8IW19 511 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■■■■ 40.2
VEGFA-225ENST00000523950 AFAP1L2Q8N4X5 818 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 METTL27Q8N6F8 245 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 TEX9Q8N6V9 391 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 PTGR2Q8N8N7 351 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 ANKRD53Q8N9V6 530 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 KCT2Q8NC54 265 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 EPS8L3Q8TE67 593 aaKnown RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 CREB3L4Q8TEY5 395 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-225ENST00000523950 MIEF2Q96C03 454 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 ARHGAP9Q9BRR9 750 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 C1QTNF3Q9BXJ4 246 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 ADNPQ9H2P0 1102 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 RHBGQ9H310 441 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 SEMA3GQ9NS98 782 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 ADGRE2Q9UHX3 823 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 TUBD1Q9UJT1 453 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 MAN2B2Q9Y2E5 1009 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 TSC22D4Q9Y3Q8 395 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 ASB1Q9Y576 335 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 MAU2Q9Y6X3 613 aa11.92□□□□□ -0.5
VEGFA-225ENST00000523950 CCDC88CQ9P219 2028 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 ANKDD1BA6NHY2 528 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 E2F3O00716 465 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 CNOT3O75175 753 aaKnown RBP11.91□□□□□ -0.5
VEGFA-225ENST00000523950 FURINP09958 794 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 ZGLP1P0C6A0 271 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 PYGBP11216 843 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 ALOX12P18054 663 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 MMP11P24347 488 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 SLCO1A2P46721 670 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 CCT5P48643 541 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 RRADP55042 308 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 GTF2H2Q13888 395 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 GTF2H2CQ6P1K8 395 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 MED27Q6P2C8 311 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 SLC22A9Q8IVM8 553 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 LAS2Q8IYD9 372 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 TMEM151AQ8N4L1 468 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 AMER3Q8N944 861 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 ZCCHC10Q8TBK6 192 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 STT3BQ8TCJ2 826 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 EXTL1Q92935 676 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 CCDC126Q96EE4 140 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 MAGEB10Q96LZ2 347 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-225ENST00000523950 TMEM109Q9BVC6 243 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 TMEM216Q9P0N5 145 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 TRPC4Q9UBN4 977 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 CTSFQ9UBX1 484 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 LGALS13Q9UHV8 139 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
VEGFA-225ENST00000523950 KCNMB2Q9Y691 235 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
VEGFA-225ENST00000523950 A0A088AWK7 358 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 SMIM23A6NLE4 172 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 A8MT66 165 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 GOLGA8RI6L899 631 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 PEX12O00623 359 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 GALR3O60755 368 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-225ENST00000523950 PRAMEF4O60810 478 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 KLHL18O94889 574 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 SIX3O95343 332 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-225ENST00000523950 STATHP02808 62 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 SERPIND1P05546 499 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 UMODP07911 640 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 RPS17P08708 135 aaKnown RBP11.9□□□□□ -0.5
VEGFA-225ENST00000523950 SMIM10L1P0DMW3 83 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 IL1RNP18510 177 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 CD22P20273 847 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 ZNF10P21506 573 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-225ENST00000523950 ATP5F1P24539 256 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-225ENST00000523950 EEF1DP29692 281 aaKnown RBP11.9□□□□□ -0.5
VEGFA-225ENST00000523950 OTX2P32243 289 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 NAA20P61599 178 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 TGM3Q08188 693 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 HYAL2Q12891 473 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 LINC00303Q3SY05 128 aa11.9□□□□□ -0.5
VEGFA-225ENST00000523950 CCDC153Q494R4 210 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms