RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 UBE2E3Q969T4 207 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 MTFMTQ96DP5 389 aaKnown RBP11.39□□□□□ -0.59
PVT1-215ENST00000522963 OR2A5Q96R48 311 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 ASPSCR1Q9BZE9 553 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 PITHD1Q9GZP4 211 aaPredicted RBP11.39□□□□□ -0.59
PVT1-215ENST00000522963 FARSBQ9NSD9 589 aaKnown RBP11.39□□□□□ -0.59
PVT1-215ENST00000522963 PCDHGA4Q9Y5G9 962 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 PCDHGA11Q9Y5H2 935 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 ADAMTS20P59510 1910 aa11.39□□□□□ -0.59
PVT1-215ENST00000522963 H0YGG7 62 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 EDF1O60869 148 aaKnown RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 PDYNP01213 254 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 STATHP02808 62 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 KITP10721 976 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 RPL14P50914 215 aaKnown RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 ARF3P61204 181 aaPredicted RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 GNGT1P63211 74 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 CYP4F2P78329 520 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 IFT88Q13099 833 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 COL28A1Q2UY09 1125 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 ZC3H12BQ5HYM0 836 aaKnown RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 FRG2Q64ET8 278 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 SCIMPQ6UWF3 145 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 VASH2Q86V25 355 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 CRLF3Q8IUI8 442 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 HUS1BQ8NHY5 278 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 CREB3L4Q8TEY5 395 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 SELENOMQ8WWX9 145 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 THAP11Q96EK4 314 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 CRELD1Q96HD1 420 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 FRG2BQ96QU4 278 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 DDA1Q9BW61 102 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 RHBGQ9H310 441 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 TUBB1Q9H4B7 451 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 ELOVL6Q9H5J4 265 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 FBXO8Q9NRD0 319 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 SIDT1Q9NXL6 827 aaKnown RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 MARCOQ9UEW3 520 aaPredicted RBP11.38□□□□□ -0.59
PVT1-215ENST00000522963 ZFP69BQ9UJL9 534 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 RARRES3Q9UL19 164 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 SNX6Q9UNH7 406 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 PLCL2Q9UPR0 1127 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 TSC22D4Q9Y3Q8 395 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 DNAJC15Q9Y5T4 150 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 AP1M2Q9Y6Q5 423 aa11.38□□□□□ -0.59
PVT1-215ENST00000522963 A0A087WV48 116 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 TEX51A0A1B0GUA7 166 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 ANKDD1BA6NHY2 528 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 STMND1H3BQB6 276 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 P2RX6O15547 441 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 STK17BO94768 372 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 TBX6O95947 436 aaPredicted RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 KRT6AP02538 564 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 KRT6BP04259 564 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 JUNP05412 331 aaKnown RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 VIMP08670 466 aaKnown RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 MSL3P1P0C860 447 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 LIPCP11150 499 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 CD82P27701 267 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 LSP1P33241 339 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 AHRP35869 848 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 PIK3CBP42338 1070 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 KRT6CP48668 564 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 VSX2P58304 361 aaPredicted RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 ACY1Q03154 408 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 CLN3Q13286 438 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 DDX39BQ13838 428 aaKnown RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 ABRAXAS2Q15018 415 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 MANEAQ5SRI9 462 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 ASPGQ86U10 573 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 PPP1R3BQ86XI6 285 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 LRRC34Q8IZ02 419 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 IL22RA1Q8N6P7 574 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 TTLQ8NG68 377 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 TWIST2Q8WVJ9 160 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 SLC13A3Q8WWT9 602 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 N4BP2L2Q92802 583 aaPredicted RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 REPS1Q96D71 796 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 TM4SF19Q96DZ7 209 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 ZNF285Q96NJ3 590 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 ZNF317Q96PQ6 595 aaPredicted RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 TEFMQ96QE5 360 aaKnown RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 HBEGFQ99075 208 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 MTERF1Q99551 399 aaKnown RBP11.37□□□□□ -0.59
PVT1-215ENST00000522963 MACROD1Q9BQ69 325 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 ULBP3Q9BZM4 244 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 FANCEQ9HB96 536 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 DMRT3Q9NQL9 472 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 FGF21Q9NSA1 209 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 PCDHGA3Q9Y5H0 932 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 PTGDR2Q9Y5Y4 395 aa11.37□□□□□ -0.59
PVT1-215ENST00000522963 PTPRQQ9UMZ3 2332 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 MAGEB17A8MXT2 336 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 TMEM150CB9EJG8 249 aa11.36□□□□□ -0.59
PVT1-215ENST00000522963 FOXE1O00358 373 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms