RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 AFAP1L2Q8N4X5 818 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 FBXO25Q8TCJ0 367 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 RHBDF1Q96CC6 855 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 PEX11GQ96HA9 241 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 BARD1Q99728 777 aaKnown RBP17.65■□□□□ 0.42
SPIDR-220ENST00000522900 RBCK1Q9BYM8 510 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 FAM129AQ9BZQ8 928 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 POPDC3Q9HBV1 291 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 RIC8BQ9NVN3 520 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 ZFP69BQ9UJL9 534 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 UTP11Q9Y3A2 253 aaKnown RBP17.65■□□□□ 0.42
SPIDR-220ENST00000522900 DYRK1BQ9Y463 629 aa17.65■□□□□ 0.42
SPIDR-220ENST00000522900 BLACEA4D250 179 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 PCDH17O14917 1159 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 FAM155BO75949 473 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 SEC24DO94855 1032 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-220ENST00000522900 ZNF888P0CJ79 500 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-220ENST00000522900 SLC12A2P55011 1212 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 OLR1P78380 273 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 REEP5Q00765 189 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 PWP1Q13610 501 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 USP10Q14694 798 aaKnown RBP17.64■□□□□ 0.41
SPIDR-220ENST00000522900 ZNF169Q14929 603 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-220ENST00000522900 DEFB134Q4QY38 66 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 CPEB2Q7Z5Q1 589 aaKnown RBP17.64■□□□□ 0.41
SPIDR-220ENST00000522900 TMPRSS11BQ86T26 416 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 CCDC25Q86WR0 208 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 PRR7Q8TB68 274 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 NT5CQ8TCD5 201 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 METTL21AQ8WXB1 218 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 PSMG3-AS1Q96PY0 264 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 RBBP8Q99708 897 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 CPNE1Q99829 537 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 SLC29A3Q9BZD2 475 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 DERL2Q9GZP9 239 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 PELI2Q9HAT8 420 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 LANCL2Q9NS86 450 aa17.64■□□□□ 0.41
SPIDR-220ENST00000522900 DOCK10Q96BY6 2186 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 NCF1BA6NI72 391 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 NCF1CA8MVU1 366 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 GALR3O60755 368 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 CDC123O75794 336 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 WFS1O76024 890 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 WDR47O94967 919 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 F10P00742 488 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 CCDC166P0CW27 439 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 RNF224P0DH78 156 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 NCF1P14598 390 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 ALOX12P18054 663 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 AHRP35869 848 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 HNF4AP41235 474 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 SLC7A5Q01650 507 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 HYAL2Q12891 473 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 CDC16Q13042 620 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 HERC3Q15034 1050 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 RBBP5Q15291 538 aaKnown RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 TGFBIQ15582 683 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 FBXO48Q5FWF7 155 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 FRA10AC1Q70Z53 315 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 ZNF572Q7Z3I7 529 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-220ENST00000522900 ANKRD37Q7Z713 158 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 CDKL2Q92772 493 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 GPR22Q99680 433 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 TUBB6Q9BUF5 446 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 AICDAQ9GZX7 198 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 KLHL31Q9H511 634 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 LRRC4CQ9HCJ2 640 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 KCNE2Q9Y6J6 123 aa17.63■□□□□ 0.41
SPIDR-220ENST00000522900 UTP20O75691 2785 aaKnown RBP17.62■□□□□ 0.41
SPIDR-220ENST00000522900 TAPBPO15533 448 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 CHST10O43529 356 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 AGFG2O95081 481 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 GP5P40197 560 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 MAGEA4P43358 317 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 TSFMP43897 325 aaKnown RBP17.62■□□□□ 0.41
SPIDR-220ENST00000522900 SLC6A12P48065 614 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 HNMTP50135 292 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 RAB8AP61006 207 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 RHAGQ02094 409 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 TLR1Q15399 786 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 OR4D1Q15615 310 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 KBTBD12Q3ZCT8 623 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 RIPOR1Q6ZS17 1223 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 ADAMTSL2Q86TH1 951 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 CTAGE3PQ8IX95 158 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 KLHDC8AQ8IYD2 350 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 TBC1D19Q8N5T2 526 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 OR1N1Q8NGS0 311 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 UTP15Q8TED0 518 aaKnown RBP17.62■□□□□ 0.41
SPIDR-220ENST00000522900 ESAMQ96AP7 390 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 AIF1LQ9BQI0 150 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 SLC6A16Q9GZN6 736 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 RAB17Q9H0T7 212 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 TXNDC16Q9P2K2 825 aa17.62■□□□□ 0.41
SPIDR-220ENST00000522900 SCN3AQ9NY46 2000 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 ESYT3A0FGR9 886 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 C4orf51C9J302 202 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 GSTA2P09210 222 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 SMIM10L1P0DMW3 83 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 C1GALT1C1LP0DN25 315 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms