RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 NUDT9Q9BW91 350 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 CD244Q9BZW8 370 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 ZFP69BQ9UJL9 534 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 ZNF180Q9UJW8 692 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 C3orf18Q9UK00 162 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 FBXL4Q9UKA2 621 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 NAALAD2Q9Y3Q0 740 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 MAP4K5Q9Y4K4 846 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 DOCK10Q96BY6 2186 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 A0A0G2JN53 185 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 NSA2O95478 260 aaKnown RBP16.91■□□□□ 0.3
CLK4-211ENST00000522556 S100BP04271 92 aaPredicted RBP16.91■□□□□ 0.3
CLK4-211ENST00000522556 SHBGP04278 402 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 SLC35G6P0C7Q6 338 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 GNAZP19086 355 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 SERPINB9P50453 376 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 OCA2Q04671 838 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 DOC2AQ14183 400 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 DEFB134Q4QY38 66 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 LACTB2Q53H82 288 aaPredicted RBP16.91■□□□□ 0.3
CLK4-211ENST00000522556 CDKL4Q5MAI5 379 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 AFAP1L2Q8N4X5 818 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 NT5CQ8TCD5 201 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 SLC6A16Q9GZN6 736 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 CPSF2Q9P2I0 782 aaKnown RBP16.91■□□□□ 0.3
CLK4-211ENST00000522556 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLK4-211ENST00000522556 NXT1Q9UKK6 140 aaKnown RBP16.91■□□□□ 0.3
CLK4-211ENST00000522556 CDC14AQ9UNH5 594 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 IKBKGQ9Y6K9 419 aa16.91■□□□□ 0.3
CLK4-211ENST00000522556 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
CLK4-211ENST00000522556 IDSB3KWA1 339 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 B8ZZF3 427 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 MKRN2OSH3BPM6 223 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 AGPSO00116 658 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 MAP2K7O14733 419 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 CEACAM4O75871 244 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 IPO13O94829 963 aaKnown RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 SIX3O95343 332 aaPredicted RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 HNRNPH1P31943 449 aaKnown RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 AHRP35869 848 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 AVPR1BP47901 424 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 RAB8AP61006 207 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 EEF1A2Q05639 463 aaKnown RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 SETDB1Q15047 1291 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 RBBP7Q16576 425 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 PFKFB4Q16877 469 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 FAM83EQ2M2I3 478 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 TOR1AIP1Q5JTV8 583 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 LRRC70Q7Z2Q7 622 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 OR11G2Q8NGC1 345 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 RHEBL1Q8TAI7 183 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 UTP15Q8TED0 518 aaKnown RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 SLC25A23Q9BV35 468 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 CNOT10Q9H9A5 744 aaKnown RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 ANKHQ9HCJ1 492 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 GPRC5BQ9NZH0 403 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 ZNF490Q9ULM2 529 aaPredicted RBP16.9■□□□□ 0.3
CLK4-211ENST00000522556 SLC22A7Q9Y694 548 aa16.9■□□□□ 0.3
CLK4-211ENST00000522556 ZNF462Q96JM2 2506 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 H0YIG0 161 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 KLK8O60259 260 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 GALR3O60755 368 aaPredicted RBP16.89■□□□□ 0.29
CLK4-211ENST00000522556 KRT38O76015 456 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 BMP10O95393 424 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 CELA2AP08217 269 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 CD63P08962 238 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 SBK3P0C264 359 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 TNFRSF8P28908 595 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 XCR1P46094 333 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 VSNL1P62760 191 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 Q0VFX4 171 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 CHIT1Q13231 466 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 PWP1Q13610 501 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 ACAP2Q15057 778 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 XKR6Q5GH73 641 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 ADGRD1Q6QNK2 874 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 TMIGD1Q6UXZ0 262 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 LANCL3Q6ZV70 420 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 MED25Q71SY5 747 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 RNF175Q8N4F7 328 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 TMEM102Q8N9M5 508 aaPredicted RBP16.89■□□□□ 0.29
CLK4-211ENST00000522556 OR51Q1Q8NH59 317 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 PEX11GQ96HA9 241 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 TRIM4Q9C037 500 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 VN1R1Q9GZP7 353 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 MLXIPLQ9NP71 852 aa16.89■□□□□ 0.29
CLK4-211ENST00000522556 MKKSQ9NPJ1 570 aaPredicted RBP16.89■□□□□ 0.29
CLK4-211ENST00000522556 ESPNB1AK53 854 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 PEX12O00623 359 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 CLGNO14967 610 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLK4-211ENST00000522556 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
CLK4-211ENST00000522556 SNRPAP09012 282 aaKnown RBP16.88■□□□□ 0.29
CLK4-211ENST00000522556 SFTPCP11686 197 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 COX6A1P12074 109 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 GFAPP14136 432 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 PLA2G2AP14555 144 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 ALOX12P18054 663 aa16.88■□□□□ 0.29
CLK4-211ENST00000522556 EMP2P54851 167 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms