RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CEP97Q8IW35 865 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 NKAPQ8N5F7 415 aaKnown RBP19.53■□□□□ 0.72
SDCBP-209ENST00000522243 HAS2Q92819 552 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 EGFL8Q99944 293 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 SARGQ9BW04 601 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.53■□□□□ 0.72
SDCBP-209ENST00000522243 C19orf25Q9UFG5 118 aaPredicted RBP19.53■□□□□ 0.72
SDCBP-209ENST00000522243 SLC22A14Q9Y267 594 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 SLC5A6Q9Y289 635 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 CNTRLQ7Z7A1 2325 aa19.53■□□□□ 0.72
SDCBP-209ENST00000522243 CTAGE15A4D2H0 777 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 A8MUI8 341 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 DDAH2O95865 285 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF888P0CJ79 500 aaPredicted RBP19.52■□□□□ 0.72
SDCBP-209ENST00000522243 SSTR1P30872 391 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 SCTRP47872 440 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 SRSF11Q05519 484 aaKnown RBP19.52■□□□□ 0.72
SDCBP-209ENST00000522243 ZNF33BQ06732 778 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 HERC3Q15034 1050 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 C18orf21Q32NC0 220 aaPredicted RBP19.52■□□□□ 0.72
SDCBP-209ENST00000522243 DEFB134Q4QY38 66 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 ABHD17BQ5VST6 288 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 FCRLBQ6BAA4 426 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 RPUSD3Q6P087 351 aaKnown RBP19.52■□□□□ 0.72
SDCBP-209ENST00000522243 CTAGE6Q86UF2 777 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 TBC1D19Q8N5T2 526 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 BBOF1Q8ND07 529 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 TSLPQ969D9 159 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 VPS39Q96JC1 886 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 C5orf34Q96MH7 638 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 STMN3Q9NZ72 180 aa19.52■□□□□ 0.72
SDCBP-209ENST00000522243 TRAV17A0A0B4J275 112 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 GALR3O60755 368 aaPredicted RBP19.51■□□□□ 0.71
SDCBP-209ENST00000522243 LDLRP01130 860 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 EDN3P14138 238 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 ALOX12P18054 663 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 HNF4AP41235 474 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 ST13P50502 369 aaKnown RBP19.51■□□□□ 0.71
SDCBP-209ENST00000522243 AP2B1P63010 937 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 RGS1Q08116 209 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 C2orf54Q08AI8 447 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 PWP1Q13610 501 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 RBBP5Q15291 538 aaKnown RBP19.51■□□□□ 0.71
SDCBP-209ENST00000522243 TSNQ15631 228 aaKnown RBP19.51■□□□□ 0.71
SDCBP-209ENST00000522243 AFAP1L2Q8N4X5 818 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 ANKRD53Q8N9V6 530 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 NT5CQ8TCD5 201 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 PYROXD1Q8WU10 500 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 TAAR6Q96RI8 345 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 RHOJQ9H4E5 214 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 GPAMQ9HCL2 828 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 SAYSD1Q9NPB0 183 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 LANCL2Q9NS86 450 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 OLAHQ9NV23 265 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 NSMCE4AQ9NXX6 385 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 CTNNAL1Q9UBT7 734 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 ZFP69BQ9UJL9 534 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 OSGIN2Q9Y236 505 aa19.51■□□□□ 0.71
SDCBP-209ENST00000522243 MTO1Q9Y2Z2 717 aaKnown RBP19.51■□□□□ 0.71
SDCBP-209ENST00000522243 USP9XQ93008 2570 aaPredicted RBP19.5■□□□□ 0.71
SDCBP-209ENST00000522243 RP1L1Q8IWN7 2480 aaPredicted RBP19.5■□□□□ 0.71
SDCBP-209ENST00000522243 HIVEP3Q5T1R4 2406 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 CXorf49A8MYA2 514 aaPredicted RBP19.5■□□□□ 0.71
SDCBP-209ENST00000522243 RAD51CO43502 376 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 CHST10O43529 356 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 CYC1P08574 325 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 AGTR2P50052 363 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 SLC12A2P55011 1212 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 RAB8AP61006 207 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 REEP5Q00765 189 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 RHAGQ02094 409 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 ACTN3Q08043 901 aaPredicted RBP19.5■□□□□ 0.71
SDCBP-209ENST00000522243 NSDHLQ15738 373 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 SFT2D3Q587I9 215 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 PLAG1Q6DJT9 500 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 NXPE4Q6UWF7 544 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 FRA10AC1Q70Z53 315 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 SPATA6LQ8N4H0 392 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 BCORP1Q8N888 145 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 PLPP5Q8NEB5 264 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 UTP15Q8TED0 518 aaKnown RBP19.5■□□□□ 0.71
SDCBP-209ENST00000522243 AIF1LQ9BQI0 150 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 ERP44Q9BS26 406 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 CAB39LQ9H9S4 337 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 PELI2Q9HAT8 420 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 KCNK13Q9HB14 408 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 OARD1Q9Y530 152 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 KCNE2Q9Y6J6 123 aa19.5■□□□□ 0.71
SDCBP-209ENST00000522243 LRRK2Q5S007 2527 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 OR5H15A6NDH6 313 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 FAM187AA6NFU0 413 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 WIPF3A6NGB9 483 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 NCF1BA6NI72 391 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-209ENST00000522243 NCF1CA8MVU1 366 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-209ENST00000522243 NDC80O14777 642 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 B4GALT2O60909 372 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 WDR47O94967 919 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 NCF1P14598 390 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-209ENST00000522243 COL8A1P27658 744 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 AHRP35869 848 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms