RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TWIST2Q8WVJ9 160 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 MS4A8Q9BY19 250 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 TUBB1Q9H4B7 451 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 SATB2Q9UPW6 733 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 TXNDC9O14530 226 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 POLR1CO15160 346 aaPredicted RBP23.03■■□□□ 1.28
PVT1-212ENST00000521951 TGFB1P01137 390 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 JMJD7P0C870 316 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 KITP10721 976 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 FGF5P12034 268 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 ID4P47928 161 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 ZNF33BQ06732 778 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 RGS1Q08116 209 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 C3orf38Q5JPI3 329 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 MANEAQ5SRI9 462 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 FOXR1Q6PIV2 292 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 KCT2Q8NC54 265 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 CMTM7Q96FZ5 175 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 CTRCQ99895 268 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 NLNQ9BYT8 704 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 SLC6A16Q9GZN6 736 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 AICDAQ9GZX7 198 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 PSD3Q9NYI0 1048 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 MARCOQ9UEW3 520 aaPredicted RBP23.03■■□□□ 1.28
PVT1-212ENST00000521951 PISDQ9UG56 409 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 PPT2Q9UMR5 302 aa23.03■■□□□ 1.28
PVT1-212ENST00000521951 RUVBL1Q9Y265 456 aaKnown RBP23.03■■□□□ 1.28
PVT1-212ENST00000521951 SERTM1A2A2V5 107 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 FITM1A5D6W6 292 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 EDF1O60869 148 aaKnown RBP23.02■■□□□ 1.28
PVT1-212ENST00000521951 SH3BGRLO75368 114 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 MAPK10P53779 464 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 PPP1R3BQ86XI6 285 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 AFAP1L2Q8N4X5 818 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 PIWIL2Q8TC59 973 aaKnown RBP23.02■■□□□ 1.28
PVT1-212ENST00000521951 FAR2Q96K12 515 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 OR51B5Q9H339 312 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 KLHL31Q9H511 634 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 BRF2Q9HAW0 419 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 PTGDR2Q9Y5Y4 395 aa23.02■■□□□ 1.28
PVT1-212ENST00000521951 LRIT2A6NDA9 550 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 ZSCAN9O15535 394 aaPredicted RBP23.01■■□□□ 1.27
PVT1-212ENST00000521951 SKAP2O75563 359 aaPredicted RBP23.01■■□□□ 1.27
PVT1-212ENST00000521951 ETHE1O95571 254 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 VIMP08670 466 aaKnown RBP23.01■■□□□ 1.27
PVT1-212ENST00000521951 PTX3P26022 381 aaPredicted RBP23.01■■□□□ 1.27
PVT1-212ENST00000521951 HNRNPH1P31943 449 aaKnown RBP23.01■■□□□ 1.27
PVT1-212ENST00000521951 CSTF3Q12996 717 aaKnown RBP23.01■■□□□ 1.27
PVT1-212ENST00000521951 GRM7Q14831 915 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 TOR1AIP1Q5JTV8 583 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 PRAMEF17Q5VTA0 474 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 TLDC1Q6P9B6 456 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 RNF165Q6ZSG1 346 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 ARHGEF39Q8N4T4 335 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 PMEPA1Q969W9 287 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 F2RL3Q96RI0 385 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 SPTBN2O15020 2390 aa23.01■■□□□ 1.27
PVT1-212ENST00000521951 PIP5K1BO14986 540 aa23■■□□□ 1.27
PVT1-212ENST00000521951 LINC00032P0C843 101 aa23■■□□□ 1.27
PVT1-212ENST00000521951 HSD3B1P14060 373 aa23■■□□□ 1.27
PVT1-212ENST00000521951 HSD3B2P26439 372 aa23■■□□□ 1.27
PVT1-212ENST00000521951 COL9A2Q14055 689 aaPredicted RBP23■■□□□ 1.27
PVT1-212ENST00000521951 PDCD2Q16342 344 aaPredicted RBP23■■□□□ 1.27
PVT1-212ENST00000521951 ADPRMQ3LIE5 342 aa23■■□□□ 1.27
PVT1-212ENST00000521951 DEPDC1Q5TB30 811 aa23■■□□□ 1.27
PVT1-212ENST00000521951 PWWP2BQ6NUJ5 590 aa23■■□□□ 1.27
PVT1-212ENST00000521951 CHSY3Q70JA7 882 aa23■■□□□ 1.27
PVT1-212ENST00000521951 TRIM46Q7Z4K8 759 aa23■■□□□ 1.27
PVT1-212ENST00000521951 DDIASQ8IXT1 998 aa23■■□□□ 1.27
PVT1-212ENST00000521951 GBP7Q8N8V2 638 aaPredicted RBP23■■□□□ 1.27
PVT1-212ENST00000521951 TTC29Q8NA56 475 aaPredicted RBP23■■□□□ 1.27
PVT1-212ENST00000521951 ZNF317Q96PQ6 595 aaPredicted RBP23■■□□□ 1.27
PVT1-212ENST00000521951 TAAR9Q96RI9 348 aa23■■□□□ 1.27
PVT1-212ENST00000521951 SERPINI1Q99574 410 aa23■■□□□ 1.27
PVT1-212ENST00000521951 ACPTQ9BZG2 426 aa23■■□□□ 1.27
PVT1-212ENST00000521951 SCN3AQ9NY46 2000 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 HYKKA2RU49 373 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 SLCO1B7G3V0H7 640 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 ZNF749O43361 778 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 TIAF1O95411 115 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 JUNP05412 331 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 GCGRP47871 477 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 RAB15P59190 212 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 STXBP1P61764 594 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 SNRPNP63162 240 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 BTKQ06187 659 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 FOXC1Q12948 553 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.99■■□□□ 1.27
PVT1-212ENST00000521951 KHDRBS2Q5VWX1 349 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 TMEM214Q6NUQ4 689 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 CEACAM20Q6UY09 585 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 WDR75Q8IWA0 830 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 LRRC34Q8IZ02 419 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 MS4A6EQ96DS6 147 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 REXO4Q9GZR2 422 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 VTI1BQ9UEU0 232 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 SLC12A4Q9UP95 1085 aa22.99■■□□□ 1.27
PVT1-212ENST00000521951 MRPS2Q9Y399 296 aaKnown RBP22.99■■□□□ 1.27
PVT1-212ENST00000521951 SLC28A1O00337 649 aa22.98■■□□□ 1.27
PVT1-212ENST00000521951 HDAC3O15379 428 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms