RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 GALNT15Q8N3T1 639 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 TTC30BQ8N4P2 665 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 PAF1Q8N7H5 531 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 CLEC18CQ8NCF0 446 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 HIPK4Q8NE63 616 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 C1orf162Q8NEQ5 155 aaPredicted RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 TRPC4APQ8TEL6 797 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ZNF483Q8TF39 744 aaPredicted RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 SETD7Q8WTS6 366 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 TWIST2Q8WVJ9 160 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 HMGB4Q8WW32 186 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ASB15Q8WXK1 588 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 EXT2Q93063 718 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 FUBP1Q96AE4 644 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 ISG20Q96AZ6 181 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 PTERQ96BW5 349 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 FAM136AQ96C01 138 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 MIEF2Q96C03 454 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 NXPE2Q96DL1 559 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 MYEOVQ96EZ4 313 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 LINGO1Q96FE5 620 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 MED8Q96G25 268 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 TOE1Q96GM8 510 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 TUBGCP5Q96RT8 1024 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ZNF382Q96SR6 550 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 GPR21Q99679 349 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 UNKQ9C0B0 810 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 FAM192AQ9GZU8 254 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 CLPBQ9H078 707 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 RNF38Q9H0F5 515 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 MID1IP1Q9NPA3 183 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ZFP64Q9NPA5 681 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 C8orf4Q9NR00 106 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ABCB8Q9NUT2 735 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 TDP1Q9NUW8 608 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 DUS2Q9NX74 493 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 CD274Q9NZQ7 290 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 CCDC167Q9P0B6 97 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 IL17CQ9P0M4 197 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 SUN2Q9UH99 717 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 VPS51Q9UID3 782 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 CROTQ9UKG9 612 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 PCTPQ9UKL6 214 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 CNOT11Q9UKZ1 510 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 RAB26Q9ULW5 256 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 DHRS7Q9Y394 339 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 SH3BP1Q9Y3L3 701 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ZNF711Q9Y462 761 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 DTNAQ9Y4J8 743 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 SPEF1Q9Y4P9 236 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ASB1Q9Y576 335 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 DNAJC15Q9Y5T4 150 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 CPQQ9Y646 472 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 WNT6Q9Y6F9 365 aa3.85□□□□□ -1.79
PVT1-211ENST00000521600 ZNF106Q9H2Y7 1883 aaKnown RBP3.85□□□□□ -1.79
PVT1-211ENST00000521600 IGHV1OR15-9A0A0B4J2B8 117 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 A0A0J9YYE9 177 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 GLYATL1P3A0A0U1RQE8 302 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 C1orf232A0A0U1RR37 186 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 TCRBV21S2A2A0A5A6 115 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 PABPN1LA6NDY0 278 aaKnown RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 NPEPPSL1A6NEC2 478 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 AQP12BA6NM10 295 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 H3BNX3 289 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 EIF3FO00303 357 aaPredicted RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 UBFD1O14562 309 aaKnown RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 PIP5K1BO14986 540 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 HTRA2O43464 458 aaPredicted RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 SNAP91O60641 907 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 CDK14O94921 469 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 KLF8O95600 359 aaPredicted RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 SCGB1D2O95969 90 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 CD160O95971 181 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 OTCP00480 354 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 TRBC1P01850 177 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 JUNP05412 331 aaKnown RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 C8BP07358 591 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 CLEC2LP0C7M8 214 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 FCGR1AP12314 374 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 MTHFD2P13995 350 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 HGFP14210 728 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 UQCRBP14927 111 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 HOXB6P17509 224 aaKnown RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 XRCC1P18887 633 aaPredicted RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 GPX3P22352 226 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 VIPR1P32241 457 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 SPAM1P38567 509 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 OPRD1P41143 372 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 CSKP41240 450 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 RGRP47804 291 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 SGSHP51688 502 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 KCNK10P57789 538 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 ERVK-8P63133 956 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 MRPS22P82650 360 aaKnown RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 MRPS21P82921 87 aaKnown RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 TIAL1Q01085 375 aaKnown RBP eCLIP3.84□□□□□ -1.793e-6■■■■□ 20.6
PVT1-211ENST00000521600 DBPQ10586 325 aaPredicted RBP3.84□□□□□ -1.79
PVT1-211ENST00000521600 TARDBPQ13148 414 aaKnown RBP eCLIP3.84□□□□□ -1.793e-7■■■■■ 27.8
PVT1-211ENST00000521600 NFATC2Q13469 925 aa3.84□□□□□ -1.79
PVT1-211ENST00000521600 PEX6Q13608 980 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms