RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 HEPHL1Q6MZM0 1159 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 TIGD7Q6NT04 549 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 KIRREL2Q6UWL6 708 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ARSKQ6UWY0 536 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 NAPRTQ6XQN6 538 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ZCCHC23Q6ZST2 131 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 Q6ZVL8 140 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 CMC1Q7Z7K0 106 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 LINC00523Q86TU6 105 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 KMT5CQ86Y97 462 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 LRRC49Q8IUZ0 686 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SIAH3Q8IW03 269 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 CLYBLQ8N0X4 340 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 UMODL1-AS1Q8N2C9 162 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 IPMKQ8NFU5 416 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ASB5Q8WWX0 329 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ISL2Q96A47 359 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 KLHL29Q96CT2 875 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC7A6OSQ96CW6 309 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 COX14Q96I36 57 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 C7orf26Q96N11 449 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ZNF641Q96N77 438 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 LRRC37BQ96QE4 947 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ZYG11BQ9C0D3 744 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 IL22Q9GZX6 179 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 NT5MQ9NPB1 228 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SNX15Q9NRS6 342 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 C20orf96Q9NUD7 363 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ARL8BQ9NVJ2 186 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 TMEM51Q9NW97 253 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 TMEM248Q9NWD8 314 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ZFATQ9P243 1243 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 PPARGC1AQ9UBK2 798 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 B4GALT6Q9UBX8 382 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC2A6Q9UGQ3 507 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 DCDC2Q9UHG0 476 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 ZFP69BQ9UJL9 534 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 HAO1Q9UJM8 370 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 CBLCQ9ULV8 474 aa6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 AAR2Q9Y312 384 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-227ENST00000521387 A0A0G2JND7 137 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 C9J4A7 227 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 AP3B1O00203 1094 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CLDN4O14493 209 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 ATP5HO75947 161 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 VIPP01282 170 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MMP2P08253 660 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MYL2P10916 166 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 NID1P14543 1247 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 LHCGRP22888 699 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 GABRB3P28472 473 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SKIV2L2P42285 1042 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CHRNA4P43681 627 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SERPINB8P50452 374 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 WNT3AP56704 352 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MAXP61244 160 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 RHOAP61586 193 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 IRF9Q00978 393 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 DSC2Q02487 901 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MTA1Q13330 715 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MPP3Q13368 585 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CAPRIN1Q14444 709 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 GRM3Q14832 879 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 POU6F1Q14863 301 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 PCLAFQ15004 111 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 DBN1Q16643 649 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 KRTCAP3Q53RY4 240 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 PDPK2PQ6A1A2 396 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 PRSS57Q6UWY2 283 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 RANBP10Q6VN20 620 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 C10orf107Q8IVU9 208 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 FAM20CQ8IXL6 584 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 PGBD5Q8N414 524 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC25A41Q8N5S1 370 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 AMER2Q8N7J2 671 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 RAB3IL1Q8TBN0 382 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 FATE1Q969F0 183 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 UTP4Q969X6 686 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 VPS39Q96JC1 886 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SECISBP2Q96T21 854 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC25A51Q9H1U9 297 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CAB39LQ9H9S4 337 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 MRM3Q9HC36 420 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SAR1AQ9NR31 198 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 SLC22A11Q9NSA0 550 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 TXLNGQ9NUQ3 528 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 TXNDC16Q9P2K2 825 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CNOT6Q9ULM6 557 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CDYLQ9Y232 598 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 TCAF1Q9Y4C2 921 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 HS3ST3B1Q9Y662 390 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 CMYA5Q8N3K9 4069 aa6.94□□□□□ -1.3
CTNNA1-227ENST00000521387 A0A096LPK6 155 aa6.93□□□□□ -1.3
CTNNA1-227ENST00000521387 A8MUI8 341 aa6.93□□□□□ -1.3
CTNNA1-227ENST00000521387 NPIPA5E9PKD4 350 aa6.93□□□□□ -1.3
CTNNA1-227ENST00000521387 FAM227AF5H4B4 570 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms