RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CD244Q9BZW8 370 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 ANKHQ9HCJ1 492 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 MLXIPLQ9NP71 852 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 C14orf105Q9NVL8 296 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 FBXL4Q9UKA2 621 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 HEMK1Q9Y5R4 338 aaPredicted RBP19.57■□□□□ 0.72
TRIM35-203ENST00000521253 SYCE1LA8MT33 242 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 IDSB3KWA1 339 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 CCNT2O60583 730 aaKnown RBP19.56■□□□□ 0.72
TRIM35-203ENST00000521253 PRAMEF4O60810 478 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 H2AFYO75367 372 aaKnown RBP19.56■□□□□ 0.72
TRIM35-203ENST00000521253 KRT38O76015 456 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 KLHL18O94889 574 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 MYBL2P10244 700 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 MTHFD2P13995 350 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 CNTFP26441 200 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 AGTR2P50052 363 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 RGS1Q08116 209 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 ACAP2Q15057 778 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 PDK4Q16654 411 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 PRAMEF9Q5VWM5 478 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 PLD6Q8N2A8 252 aaKnown RBP19.56■□□□□ 0.72
TRIM35-203ENST00000521253 AFAP1L2Q8N4X5 818 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 CLEC1AQ8NC01 280 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 HCN3Q9P1Z3 774 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 NAALAD2Q9Y3Q0 740 aa19.56■□□□□ 0.72
TRIM35-203ENST00000521253 GCN1Q92616 2671 aaKnown RBP19.55■□□□□ 0.72
TRIM35-203ENST00000521253 CCDC189A1A4V9 331 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 TRIM49D1C9J1S8 452 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 MAP2K7O14733 419 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 CLGNO14967 610 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 ALOX12BO75342 701 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 RDH16O75452 317 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 BMP10O95393 424 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 EPORP19235 508 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 CXCR2P25025 360 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 PGDP52209 483 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 EMP2P54851 167 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 RAPSNQ13702 412 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 HERC3Q15034 1050 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 KLC3Q6P597 504 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 TMIGD1Q6UXZ0 262 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 LRRC70Q7Z2Q7 622 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 PRICKLE2Q7Z3G6 844 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.55■□□□□ 0.72
TRIM35-203ENST00000521253 GALNT16Q8N428 558 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 TRPV3Q8NET8 790 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 OR11G2Q8NGC1 345 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 OR51Q1Q8NH59 317 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 CREB3L4Q8TEY5 395 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 UBTD2Q8WUN7 234 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 NUDT9Q9BW91 350 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 HELZ2Q9BYK8 2649 aaKnown RBP19.55■□□□□ 0.72
TRIM35-203ENST00000521253 SLC6A16Q9GZN6 736 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 EHD1Q9H4M9 534 aa19.55■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF860A6NHJ4 632 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 SUV39H1O43463 412 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 SLC28A2O43868 658 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 GALR3O60755 368 aaPredicted RBP19.54■□□□□ 0.72
TRIM35-203ENST00000521253 JRKO75564 520 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 HEXBP07686 556 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF888P0CJ79 500 aaPredicted RBP19.54■□□□□ 0.72
TRIM35-203ENST00000521253 PLA2G2AP14555 144 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 ALOX12P18054 663 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 GCAP28676 217 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 HNF4AP41235 474 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 EFNA3P52797 238 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 HYAL2Q12891 473 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 DOC2AQ14183 400 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 DEFB134Q4QY38 66 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 XKR6Q5GH73 641 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 KRT78Q8N1N4 520 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 EIF1ADQ8N9N8 165 aaKnown RBP19.54■□□□□ 0.72
TRIM35-203ENST00000521253 C8orf44Q96CB5 159 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 WDR34Q96EX3 536 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 EPB41L4BQ9H329 900 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 ATP13A2Q9NQ11 1180 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF358Q9NW07 568 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 GPR83Q9NYM4 423 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 COPG2Q9UBF2 871 aa19.54■□□□□ 0.72
TRIM35-203ENST00000521253 B3GALT4O96024 378 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 SERPINA6P08185 405 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 SNRPAP09012 282 aaKnown RBP19.53■□□□□ 0.72
TRIM35-203ENST00000521253 GFAPP14136 432 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 ACPPP15309 386 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 CD22P20273 847 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 XCR1P46094 333 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 SLC29A2Q14542 456 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 PFKFB4Q16877 469 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 TUBB8Q3ZCM7 444 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 TECRLQ5HYJ1 363 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 ABHD13Q7L211 337 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 OR5T3Q8NGG3 340 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 UTP15Q8TED0 518 aaKnown RBP19.53■□□□□ 0.72
TRIM35-203ENST00000521253 PTCD3Q96EY7 689 aaKnown RBP19.53■□□□□ 0.72
TRIM35-203ENST00000521253 VPS50Q96JG6 964 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 PITHD1Q9GZP4 211 aaPredicted RBP19.53■□□□□ 0.72
TRIM35-203ENST00000521253 AICDAQ9GZX7 198 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 KLHL31Q9H511 634 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 NT5DC2Q9H857 520 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms