RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 NCKAP1Q9Y2A7 1128 aa6.81□□□□□ -1.32
SDCBP-208ENST00000520228 HELZP42694 1942 aaKnown RBP6.81□□□□□ -1.32
SDCBP-208ENST00000520228 CXorf51AA0A1B0GTR3 108 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 TMEM110-MUSTN1A8MSY1 372 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 MCF2LO15068 1137 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 ALOX15BO15296 676 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 MID1O15344 667 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 BUB1O43683 1085 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 KDELR3O43731 214 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 RNASEH2AO75792 299 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 ZNF806P0C7X5 589 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 PSG1P11464 419 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 GOT1P17174 413 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 ERCC2P18074 760 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 CYLC1P35663 651 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 MAGEA1P43355 309 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 SERPINH1P50454 418 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 NDST2P52849 883 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 EFNB1P98172 346 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 MPP1Q00013 466 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 SLC25A11Q02978 314 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 ZNF33AQ06730 810 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 KRT81Q14533 505 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 MESDQ14696 234 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 SPA17Q15506 151 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 DPYSL2Q16555 572 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 HADHQ16836 314 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 OTOGLQ3ZCN5 2332 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 FAM46CQ5VWP2 391 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 TXNRD3NBQ6F5E7 133 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 LEKR1Q6ZMV7 388 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 H1FNTQ75WM6 255 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 CAMK1DQ8IU85 385 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 HDDC3Q8N4P3 179 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 PCDH20Q8N6Y1 951 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 PCYOX1LQ8NBM8 494 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 CADM4Q8NFZ8 388 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 OR2A12Q8NGT7 310 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 TEKT4Q8WW24 435 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 HMCESQ96FZ2 354 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 CELF6Q96J87 481 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 OMDQ99983 421 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 GPR174Q9BXC1 333 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 SIRT3Q9NTG7 399 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 FBXL12Q9NXK8 326 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 CWC15Q9P013 229 aaKnown RBP6.8□□□□□ -1.32
SDCBP-208ENST00000520228 RAI2Q9Y5P3 530 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 FRYLO94915 3013 aa6.8□□□□□ -1.32
SDCBP-208ENST00000520228 ARHGAP10A1A4S6 786 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ZSCAN5CA6NGD5 496 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-208ENST00000520228 FAM47DPA6NHR8 397 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ARHGAP42A6NI28 874 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 MEI4A8MW99 385 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 STMND1H3BQB6 276 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 MTA2O94776 668 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 IPO7O95373 1038 aaKnown RBP6.79□□□□□ -1.32
SDCBP-208ENST00000520228 LCA5LO95447 670 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 CLDN7O95471 211 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SEMA4FO95754 770 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 CD160O95971 181 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 KRT7P08729 469 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 CHRNA3P32297 505 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ACSL1P33121 698 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 MAN1A1P33908 653 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 TTKP33981 857 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 GPR12P47775 334 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SELENOVP59797 346 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ARF5P84085 180 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 DPYSQ14117 519 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SF3A2Q15428 464 aaKnown RBP6.79□□□□□ -1.32
SDCBP-208ENST00000520228 POM121L1PQ3SYA9 428 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 CARD16Q5EG05 197 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 C22orf39Q6P5X5 142 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SLC16A12Q6ZSM3 486 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 RABEPKQ7Z6M1 372 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 MAP7D3Q8IWC1 876 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 RYBPQ8N488 228 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-208ENST00000520228 AADATQ8N5Z0 425 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SPC24Q8NBT2 197 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 KCTD6Q8NC69 237 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 CEP76Q8TAP6 659 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 RFFLQ8WZ73 363 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ZUFSPQ96AP4 578 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ISG20Q96AZ6 181 aaKnown RBP6.79□□□□□ -1.32
SDCBP-208ENST00000520228 CSPG4P5Q96PW8 444 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 BAG1Q99933 345 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SLC39A8Q9C0K1 460 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 NEUROG2Q9H2A3 272 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 LRRC19Q9H756 370 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SGK2Q9HBY8 427 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 IL1RAPL1Q9NZN1 696 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 PILRBQ9UKJ0 227 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 SARDHQ9UL12 918 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 USP34Q70CQ2 3546 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 MIA3Q5JRA6 1907 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 FAM186AA6NE01 2351 aa6.79□□□□□ -1.32
SDCBP-208ENST00000520228 ATXN2Q99700 1313 aaKnown RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 A0A096LPK6 155 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 A0A1W2PQM1 296 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 LRRC72A6NJI9 287 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms