RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 RNF215Q9Y6U7 377 aa5.64□□□□□ -1.51
SQLE-203ENST00000518931 A0A0J9YYE9 177 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 BTBD17A6NE02 478 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 SUPT3HB4E1H0 165 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ZNF701M0R085 212 aaPredicted RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 SNAP23O00161 211 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ARHGEF9O43307 516 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 PPIP5K2O43314 1243 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 DCXO43602 365 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 PLRG1O43660 514 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 HBP1O60381 514 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 OR5F1O95221 314 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 TRBC1P01850 177 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 SLC2A3P11169 496 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 MSR1P21757 451 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 TIA1P31483 386 aaKnown RBP eCLIP5.63□□□□□ -1.511e-5■□□□□ 11
SQLE-203ENST00000518931 CDAP32320 146 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 EVI2BP34910 448 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 HTR6P50406 440 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ARSFP54793 590 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 P2RX3P56373 397 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 CLDN8P56748 225 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 TSPAN5P62079 268 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 YWHAEP62258 255 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 SNCBQ16143 134 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 HNRNPA1L2Q32P51 320 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 FAM98BQ52LJ0 330 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 TBC1D9BQ66K14 1250 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 CLEC6AQ6EIG7 209 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 KIAA1161Q6NSJ0 714 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 GJB7Q6PEY0 223 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 DLEU7Q6UYE1 221 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 CTU1Q7Z7A3 348 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 MISPQ8IVT2 679 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 FOXRED2Q8IWF2 684 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 C7orf57Q8NEG2 295 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ENGASEQ8NFI3 743 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 EXD1Q8NHP7 514 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 LKAAEAR1Q8TD35 194 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ZNF333Q96JL9 665 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 LRFN5Q96NI6 719 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 PANX3Q96QZ0 392 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 OR1F2PQ96R84 312 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ABHD6Q9BV23 337 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 POLDIP3Q9BY77 421 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 FRMD8P1Q9BZ68 369 aaPredicted RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 CYP3A43Q9HB55 503 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 SLC6A13Q9NSD5 602 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 FKBP14Q9NWM8 211 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 PAG1Q9NWQ8 432 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 SLC39A1Q9NY26 324 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 SLCO1C1Q9NYB5 712 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 GRHL1Q9NZI5 618 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 KIAA1456Q9P272 454 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 ABI3Q9P2A4 366 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 CHMP2BQ9UQN3 213 aa5.63□□□□□ -1.51
SQLE-203ENST00000518931 BZW2Q9Y6E2 419 aaKnown RBP5.63□□□□□ -1.51
SQLE-203ENST00000518931 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 TCP11X1B4DZS4 312 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 H3BMM5 538 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 HSPB6O14558 160 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 ANKRD28O15084 1053 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 HDAC3O15379 428 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 MAGEB2O15479 319 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 RNMTO43148 476 aaKnown RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 AKR7A2O43488 359 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 CLN5O75503 358 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 CSDE1O75534 798 aaKnown RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 RAD51DO75771 328 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 CDK14O94921 469 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 KDM4BO94953 1096 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 PGLSO95336 258 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 HOXB5P09067 269 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 HOXB2P14652 356 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 PTNP21246 168 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 SUOXP51687 545 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 LINC00205P59089 165 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 YWHAGP61981 247 aaKnown RBP eCLIP5.62□□□□□ -1.51
SQLE-203ENST00000518931 HSF2Q03933 536 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 SGO1Q5FBB7 561 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 PPP6R3Q5H9R7 873 aaPredicted RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 LRRC38Q5VT99 294 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 KCTD11Q693B1 232 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 TMEM71Q6P5X7 295 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 DET1Q7L5Y6 550 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 FJX1Q86VR8 437 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 GRAMD2AQ8IUY3 354 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 ARID3BQ8IVW6 561 aaPredicted RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 KATNAL2Q8IYT4 538 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 OFCC1Q8IZS5 231 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 CDC26Q8NHZ8 85 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 ST6GALNAC6Q969X2 333 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 CIDECQ96AQ7 238 aaPredicted RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 HAVCR1Q96D42 359 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 RRNAD1Q96FB5 475 aaKnown RBP5.62□□□□□ -1.51
SQLE-203ENST00000518931 LINGO1Q96FE5 620 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 SLC47A1Q96FL8 570 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 CHMP6Q96FZ7 201 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 SENP8Q96LD8 212 aa5.62□□□□□ -1.51
SQLE-203ENST00000518931 APOLD1Q96LR9 279 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms