RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ZDBF2Q9HCK1 2354 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C15orf38-AP3S2A0A0A6YYH1 394 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 A0A0J9YY10 115 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ARHGAP10A1A4S6 786 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR2A25A4D2G3 310 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LRIT2A6NDA9 550 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OR5K3A6NET4 321 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LILRA5A6NI73 299 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FXYD1O00168 92 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TRIM38O00635 465 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PLPP1O14494 284 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HAT1O14929 419 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SCAMP2O15127 329 aaKnown RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CAPN5O15484 640 aaPredicted RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TNFSF14O43557 240 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NOBOXO60393 691 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ENTPD5O75356 428 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 UBXN7O94888 489 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KCNH1O95259 989 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ATP6V1G2O95670 118 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TBX6O95947 436 aaPredicted RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KLK1P06870 262 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 COX7A2P14406 83 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TYRP1P17643 537 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MAGP20916 626 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CNR2P34972 360 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RPL3P39023 403 aaKnown RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ARRB1P49407 418 aaPredicted RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC7A2P52569 658 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RGS1Q08116 209 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C2orf80Q0P641 193 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PWP1Q13610 501 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CEACAM7Q14002 265 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CAPRIN1Q14444 709 aaKnown RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 KPNB1Q14974 876 aaKnown RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZIC1Q15915 447 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 UGT8Q16880 541 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC5A12Q1EHB4 618 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HKDC1Q2TB90 917 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DEFB133Q30KQ1 61 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C14orf28Q4W4Y0 310 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C6orf10Q5SRN2 563 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CCNYL2Q5T2Q4 361 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 OGFOD3Q6PK18 319 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 FIGLAQ6QHK4 219 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SPESP1Q6UW49 350 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MSANTD1Q6ZTZ1 278 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CEP68Q76N32 757 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ARPINQ7Z6K5 226 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 GPR180Q86V85 440 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NUDT13Q86X67 352 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TMEM132CQ8N3T6 1108 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RNF148Q8N7C7 305 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DNAJB8Q8NHS0 232 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CREB3L4Q8TEY5 395 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 C16orf78Q8WTQ4 265 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NUDT8Q8WV74 236 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 WDR60Q8WVS4 1066 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NELL1Q92832 810 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 STMN2Q93045 179 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ZUFSPQ96AP4 578 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ITCHQ96J02 903 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC38A3Q99624 504 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PRPF18Q99633 342 aaKnown RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC39A3Q9BRY0 314 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RASSF4Q9H2L5 321 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 REEP4Q9H6H4 257 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 MYNNQ9NPC7 610 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 UCKL1Q9NWZ5 548 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TMEM181Q9P2C4 612 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BCAP29Q9UHQ4 241 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PILRBQ9UKJ0 227 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PACSIN3Q9UKS6 424 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 POMPQ9Y244 141 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 WBP11Q9Y2W2 641 aaKnown RBP7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 L3MBTL1Q9Y468 752 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SNX11Q9Y5W9 270 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 CSNK1G3Q9Y6M4 447 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 AP1M2Q9Y6Q5 423 aa7.3□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NUP214P35658 2090 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RHPN2P1A8MT19 583 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 RTCAO00442 366 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 NME4O00746 187 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PPM1DO15297 605 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HRO43593 1189 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 ERN1O75460 977 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SORBS2O94875 1100 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 STAMBPO95630 424 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 LMNAP02545 664 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 GBAP04062 536 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 PROS1P07225 676 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC35G6P0C7Q6 338 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HOXB3P14651 431 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 DDX5P17844 614 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 SLC6A2P23975 617 aa7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 TPP2P29144 1249 aaPredicted RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 HNRNPH1P31943 449 aaKnown RBP7.29□□□□□ -1.24
SCARNA20.1-201ENST00000516009 BSGP35613 385 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms