RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 RTL6Q6ICC9 239 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 MDGA2Q7Z553 956 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 VN1R4Q7Z5H5 301 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 PCGF5Q86SE9 256 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 PDSS2Q86YH6 399 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 CIARTQ8N365 385 aaPredicted RBP9.8□□□□□ -0.84
CLDND1-231ENST00000515620 VWA5B2Q8N398 1253 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 PPFIBP2Q8ND30 876 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 PLPP5Q8NEB5 264 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 OR9A1PQ8NGU1 263 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 OR4L1Q8NH43 312 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 CREB3L4Q8TEY5 395 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 IQCDQ96DY2 449 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 PANX3Q96QZ0 392 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 SARGQ9BW04 601 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 MARCH4Q9P2E8 410 aaPredicted RBP9.8□□□□□ -0.84
CLDND1-231ENST00000515620 ADAM21Q9UKJ8 722 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 LIPGQ9Y5X9 500 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 HIVEP2P31629 2446 aa9.8□□□□□ -0.84
CLDND1-231ENST00000515620 DNAJC13O75165 2243 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 PINLYPA6NC86 204 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 ACOT7O00154 380 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 MYO1CO00159 1063 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 SMAPO00193 183 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 BCKDKO14874 412 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 SMAD7O15105 426 aaKnown RBP9.79□□□□□ -0.84
CLDND1-231ENST00000515620 PJA2O43164 708 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 TUBB4AP04350 444 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 PNLIPRP1P54315 467 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 PRAMEP78395 509 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 MPP1Q00013 466 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 PARP6Q2NL67 630 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 ANKRD20A4Q4UJ75 823 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 AARS2Q5JTZ9 985 aaKnown RBP9.79□□□□□ -0.84
CLDND1-231ENST00000515620 C1orf185Q5T7R7 199 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 TSTD2Q5T7W7 516 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 MEI1Q5TIA1 1274 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 SHEQ5VZ18 495 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 TMEM214Q6NUQ4 689 aaKnown RBP9.79□□□□□ -0.84
CLDND1-231ENST00000515620 TMEM156Q8N614 296 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 OR5T3Q8NGG3 340 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 OR52K1Q8NGK4 314 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 KRT35Q92764 455 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 FAM136AQ96C01 138 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 MRFAP1L1Q96HT8 127 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 CCDC138Q96M89 665 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 ZNF778Q96MU6 729 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 OR1F2PQ96R84 312 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 DEFB126Q9BYW3 111 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 DEPPQ9NTK1 212 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 NAALAD2Q9Y3Q0 740 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 ZNF407Q9C0G0 2248 aa9.79□□□□□ -0.84
CLDND1-231ENST00000515620 A0A0G2JMM0 328 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 A0A1W2PPB8 328 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 A0A1W2PRS3 328 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 C2orf72A6NCS6 295 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 OR14I1A6ND48 311 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 SAGE2PA6NJ88 616 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 KIR3DP1A8MWS1 328 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 H7BY64 318 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 KPNA5O15131 536 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ITGA10O75578 1167 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 MATN4O95460 622 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 FHP07954 510 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 CD53P19397 219 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 TTPAP49638 278 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 EIF3BP55884 814 aaKnown RBP9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ABATP80404 500 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ARHGAP19Q14CB8 494 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 Q5PR19 223 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 THEMIS2Q5TEJ8 643 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 FAM71DQ8N9W8 422 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 RELL2Q8NC24 303 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-231ENST00000515620 KCT2Q8NC54 265 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 PSD4Q8NDX1 1056 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 SIMC1Q8NDZ2 872 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ARMC2Q8NEN0 867 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 PRAP1Q96NZ9 151 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 PKP4Q99569 1192 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 EBNA1BP2Q99848 306 aaKnown RBP9.78□□□□□ -0.84
CLDND1-231ENST00000515620 PLEKHF2Q9H8W4 249 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ZDHHC11Q9H8X9 412 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 FAM114A2Q9NRY5 505 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 CATSPERZQ9NTU4 200 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 BEX4Q9NWD9 120 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-231ENST00000515620 KCMF1Q9P0J7 381 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 B4GALT7Q9UBV7 327 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ANAPC5Q9UJX4 755 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 ERVK-11Q9UQG0 969 aa9.78□□□□□ -0.84
CLDND1-231ENST00000515620 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLDND1-231ENST00000515620 TRBV11-1A0A0K0K1C0 115 aa9.77□□□□□ -0.85
CLDND1-231ENST00000515620 ZNF839A8K0R7 811 aa9.77□□□□□ -0.85
CLDND1-231ENST00000515620 FAM47E-STBD1D6RA91 191 aa9.77□□□□□ -0.85
CLDND1-231ENST00000515620 G3V3Y1 287 aa9.77□□□□□ -0.85
CLDND1-231ENST00000515620 SYT5O00445 386 aa9.77□□□□□ -0.85
CLDND1-231ENST00000515620 ARHGEF9O43307 516 aa9.77□□□□□ -0.85
CLDND1-231ENST00000515620 KIF5CO60282 957 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms