RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 SP140Q13342 867 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 CDSNQ15517 529 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 NSDHLQ15738 373 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 SPINK14Q6IE38 97 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 CAPN13Q6MZZ7 669 aaPredicted RBP17.3■□□□□ 0.36
SPOP-220ENST00000515508 TTC27Q6P3X3 843 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 AGTRAPQ6RW13 159 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 LCTLQ6UWM7 567 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 MBOAT1Q6ZNC8 495 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 AGGF1Q8N302 714 aaeCLIP17.3■□□□□ 0.36
SPOP-220ENST00000515508 AFAP1L2Q8N4X5 818 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 SARGQ9BW04 601 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 C20orf96Q9NUD7 363 aaPredicted RBP17.3■□□□□ 0.36
SPOP-220ENST00000515508 FBXO5Q9UKT4 447 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 MEMO1Q9Y316 297 aa17.3■□□□□ 0.36
SPOP-220ENST00000515508 CDC123O75794 336 aaPredicted RBP17.29■□□□□ 0.36
SPOP-220ENST00000515508 CLDN14O95500 239 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 CXCR5P32302 372 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 SLC26A5P58743 744 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 TIAL1Q01085 375 aaKnown RBP eCLIP17.29■□□□□ 0.36
SPOP-220ENST00000515508 HERC3Q15034 1050 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 GALNTL5Q7Z4T8 443 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 ZNF295-AS1Q8N0V1 137 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 HORMAD2Q8N7B1 307 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 MFSD9Q8NBP5 474 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 TRIM58Q8NG06 486 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 TSLPQ969D9 159 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 MTFMTQ96DP5 389 aaKnown RBP17.29■□□□□ 0.36
SPOP-220ENST00000515508 PEX11GQ96HA9 241 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 FAM167BQ9BTA0 163 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 RBCK1Q9BYM8 510 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 TSPAN10Q9H1Z9 355 aaPredicted RBP17.29■□□□□ 0.36
SPOP-220ENST00000515508 PARVBQ9HBI1 364 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 LZTFL1Q9NQ48 299 aa17.29■□□□□ 0.36
SPOP-220ENST00000515508 TRMT6Q9UJA5 497 aaKnown RBP17.29■□□□□ 0.36
SPOP-220ENST00000515508 ZNF860A6NHJ4 632 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 NPIPA5E9PKD4 350 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 GOLGA8MH3BSY2 632 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 C19orf84I3L1E1 186 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 SLC16A5O15375 505 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 FHP07954 510 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 CDH1P12830 882 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 GRK3P35626 688 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 ST13P50502 369 aaKnown RBP17.28■□□□□ 0.36
SPOP-220ENST00000515508 RIPPLY3P57055 190 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 TAS2R50P59544 299 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 GTF3C1Q12789 2109 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 NAE1Q13564 534 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 UGT3A1Q6NUS8 523 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 CHERPQ8IWX8 916 aaKnown RBP17.28■□□□□ 0.36
SPOP-220ENST00000515508 FAM98AQ8NCA5 519 aaKnown RBP17.28■□□□□ 0.36
SPOP-220ENST00000515508 ZNF740Q8NDX6 193 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 ABHD11Q8NFV4 315 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 OR5T3Q8NGG3 340 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 ELP5Q8TE02 316 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 EEF1AKMT1Q8WVE0 214 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 SIGLEC10Q96LC7 697 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 ATG10Q9H0Y0 220 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 NPIPA1Q9UND3 350 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 NEU2Q9Y3R4 380 aa17.28■□□□□ 0.36
SPOP-220ENST00000515508 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 ASNA1O43681 348 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 GALR3O60755 368 aaPredicted RBP17.27■□□□□ 0.36
SPOP-220ENST00000515508 SP1P08047 785 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 NPPBP16860 134 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 SSTR2P30874 369 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 RGS4P49798 205 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 OR4D2P58180 307 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 OC90Q02509 493 aaPredicted RBP17.27■□□□□ 0.36
SPOP-220ENST00000515508 ACTN3Q08043 901 aaPredicted RBP17.27■□□□□ 0.36
SPOP-220ENST00000515508 DHX9Q08211 1270 aaKnown RBP17.27■□□□□ 0.36
SPOP-220ENST00000515508 PHKG1Q16816 387 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 HSP90AA5PQ58FG0 334 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 SLC25A25Q6KCM7 469 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 GHDCQ8N2G8 530 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 OR4K1Q8NGD4 311 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 PHF10Q8WUB8 498 aaKnown RBP17.27■□□□□ 0.36
SPOP-220ENST00000515508 TBC1D20Q96BZ9 403 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 HAUS8Q9BT25 410 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 TRIM45Q9H8W5 580 aaPredicted RBP17.27■□□□□ 0.36
SPOP-220ENST00000515508 GPAMQ9HCL2 828 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 LRFN1Q9P244 771 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 MAD1L1Q9Y6D9 718 aa17.27■□□□□ 0.36
SPOP-220ENST00000515508 NDUFS4O43181 175 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 NME2P1O60361 137 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 SLC25A12O75746 678 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 CCDC175P0C221 793 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 NME2P22392 152 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 JAK1P23458 1154 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 SKP1P63208 163 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 PWP1Q13610 501 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 ZNF468Q5VIY5 522 aaPredicted RBP17.26■□□□□ 0.35
SPOP-220ENST00000515508 NIPAL1Q6NVV3 410 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.26■□□□□ 0.35
SPOP-220ENST00000515508 STRA8Q7Z7C7 330 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 RPS19BP1Q86WX3 136 aaKnown RBP17.26■□□□□ 0.35
SPOP-220ENST00000515508 PALM2Q8IXS6 379 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 MYO1HQ8N1T3 1032 aa17.26■□□□□ 0.35
SPOP-220ENST00000515508 NAT8LQ8N9F0 302 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms