RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PRMT1Q99873 361 aaKnown RBP4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 CACNG6Q9BXT2 260 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF350Q9GZX5 532 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 MRPL17Q9NRX2 175 aaKnown RBP4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 DNAJC17Q9NVM6 304 aaKnown RBP4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 SLC12A6Q9UHW9 1150 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 SPATA31D1Q6ZQQ2 1576 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 A0A087WZ39 114 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ANKDD1BA6NHY2 528 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 SDR42E2A6NKP2 422 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 A8MVM7 634 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 SLC33A1O00400 549 aaPredicted RBP4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ECE2O60344 883 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 GH1P01241 217 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ZSCAN5DPP0CG00 497 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 AADACP22760 399 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 IER3P46695 156 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ST8SIA6P61647 398 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ASIC1P78348 528 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 C17orf67Q0P5P2 114 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF674Q2M3X9 581 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 HLA-BQ31612 363 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 PM20D1Q6GTS8 502 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 CCDC170Q8IYT3 715 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 HCAR2Q8TDS4 363 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 PTP4A1Q93096 173 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 DGCR6LQ9BY27 220 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 SLC39A8Q9C0K1 460 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 MMADHCQ9H3L0 296 aaPredicted RBP4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ABCB8Q9NUT2 735 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 ARGLU1Q9NWB6 273 aaPredicted RBP4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 LEF1Q9UJU2 399 aaPredicted RBP4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 POMT2Q9UKY4 750 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 NEDD4P46934 1319 aa4.39□□□□□ -1.71
HMGCS1-207ENST00000514610 PGRMC2O15173 223 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 FMO6PO60774 539 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 NXPH2O95156 264 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 IGHEP01854 428 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 MT-ND2P03891 347 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 HLA-FP30511 346 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 SRD5A2P31213 254 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 MAGEB1P43366 347 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 ADARP55265 1226 aaKnown RBP4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 BTG1P62324 171 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 PMP22Q01453 160 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 ZC2HC1BQ5TFG8 222 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 IQCA1Q86XH1 822 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 SIAH3Q8IW03 269 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 FAM9BQ8IZU0 186 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF614Q8N883 585 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 CKAP2Q8WWK9 683 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 SLCO2A1Q92959 643 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 RASL10BQ96S79 203 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 KRT12Q99456 494 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 SYT15Q9BQS2 421 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 RPF1Q9H9Y2 349 aaKnown RBP4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 SPHK2Q9NRA0 654 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 ASIC3Q9UHC3 531 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 FBXL5Q9UKA1 691 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 EXOGQ9Y2C4 368 aaKnown RBP4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 SELENOKQ9Y6D0 94 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 CSNK1G3Q9Y6M4 447 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 PFASO15067 1338 aa4.38□□□□□ -1.71
HMGCS1-207ENST00000514610 A0A0A6YYC8 382 aaPredicted RBP4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 MEX3AA1L020 520 aaKnown RBP4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 NPIPB9F8W1W9 429 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 I3L1I5 382 aaPredicted RBP4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 MAGEB2O15479 319 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 TTI1O43156 1089 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 TYMPP19971 482 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 CLK1P49759 484 aaKnown RBP4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 IRX4P78413 519 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 CETN1Q12798 172 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 KBTBD12Q3ZCT8 623 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 GLRA4Q5JXX5 417 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 CEP85LQ5SZL2 805 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 KRTAP7-1Q8IUC3 87 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 NUP93Q8N1F7 819 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 SMYD1Q8NB12 490 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 CD99L2Q8TCZ2 262 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 OPRPNQ99935 248 aaPredicted RBP4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF559Q9BR84 538 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 ACPTQ9BZG2 426 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 HOXD1Q9GZZ0 328 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 VPS33BQ9H267 617 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 GPR173Q9NS66 373 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 PDRG1Q9NUG6 133 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 EXOC1Q9NV70 894 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 TMOD3Q9NYL9 352 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 POLKQ9UBT6 870 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 NCKAP1Q9Y2A7 1128 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 NPHP3Q7Z494 1330 aa4.37□□□□□ -1.71
HMGCS1-207ENST00000514610 SLC1A7O00341 560 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms