RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 EXT1Q16394 746 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 SPANXN3Q5MJ09 141 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 DUPD1Q68J44 220 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 PAPD4Q6PIY7 484 aaKnown RBP11.49□□□□□ -0.57
SNHG4-208ENST00000514110 SLC35F6Q8N357 371 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 AFAP1L2Q8N4X5 818 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 PLPP5Q8NEB5 264 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 ABHD11Q8NFV4 315 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 OR56A3Q8NH54 315 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 M1APQ8TC57 530 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 OR4K3Q96R72 315 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 HAUS8Q9BT25 410 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 SARGQ9BW04 601 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 FAM129AQ9BZQ8 928 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 SPNS1Q9H2V7 528 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 MMP25Q9NPA2 562 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 KLHL1Q9NR64 748 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 ARL15Q9NXU5 204 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 PCDHGB6Q9Y5F9 930 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 FBN2P35556 2912 aa11.49□□□□□ -0.57
SNHG4-208ENST00000514110 CREBBPQ92793 2442 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 CTAGE15A4D2H0 777 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 DNALI1O14645 258 aaPredicted RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 OR1F1O43749 312 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 GALR3O60755 368 aaPredicted RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 SERPIND1P05546 499 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 FHP07954 510 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 HIST1H2AGP0C0S8 130 aaPredicted RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 HIST1H2ADP20671 130 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 OR4D2P58180 307 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 IL2P60568 153 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 OLR1P78380 273 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 USP10Q14694 798 aaKnown RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 HERC3Q15034 1050 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 OR1C1Q15619 314 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 MEP1AQ16819 746 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 DEFB134Q4QY38 66 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 CATSPEREQ5SY80 951 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 TEDDM1Q5T9Z0 273 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 HECTD2Q5U5R9 776 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 KIAA0408Q6ZU52 694 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 GALNT7Q86SF2 657 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 CTAGE6Q86UF2 777 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 MCEMP1Q8IX19 187 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 CERS2Q96G23 380 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 SCMH1Q96GD3 660 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 SNF8Q96H20 258 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 HIST1H2AHQ96KK5 128 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 OR1F2PQ96R84 312 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 LPAR4Q99677 370 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 OLFM1Q99784 485 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 HIST1H2AJQ99878 128 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 H2AFJQ9BTM1 129 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 DDX47Q9H0S4 455 aaKnown RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 SUCOQ9UBS9 1254 aaKnown RBP11.48□□□□□ -0.57
SNHG4-208ENST00000514110 ASIC3Q9UHC3 531 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 IKZF3Q9UKT9 509 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 APCP25054 2843 aa11.48□□□□□ -0.57
SNHG4-208ENST00000514110 MYO7BQ6PIF6 2116 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 TRBC2A0A5B9 178 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 GABRR3A8MPY1 467 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 MAGEB17A8MXT2 336 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 FAM227AF5H4B4 570 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 TTI1O43156 1089 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 CHST10O43529 356 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 NRDCO43847 1150 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 SLC19A2O60779 497 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 GUCA1CO95843 209 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 ZNF888P0CJ79 500 aaPredicted RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 ALOX12P18054 663 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 IL10P22301 178 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 IVDP26440 423 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 AP1S2P56377 157 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 SLC26A5P58743 744 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 RBPJQ06330 500 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 PWP1Q13610 501 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 C3AR1Q16581 482 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 BBS9Q3SYG4 887 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 HP1BP3Q5SSJ5 553 aaPredicted RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 ZNF468Q5VIY5 522 aaPredicted RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 TRMT10BQ6PF06 316 aaKnown RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 KIF2BQ8N4N8 673 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 ZNF808Q8N4W9 903 aaPredicted RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 GPATCH11Q8N954 259 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 GABPB2Q8TAK5 448 aaPredicted RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 NEIL2Q969S2 332 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 TBC1D20Q96BZ9 403 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 FBXL8Q96CD0 374 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 CFAP36Q96G28 342 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 PWWP2AQ96N64 755 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 TSNARE1Q96NA8 513 aa11.47□□□□□ -0.57
SNHG4-208ENST00000514110 UTP23Q9BRU9 249 aaKnown RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 WDR83Q9BRX9 315 aaKnown RBP11.47□□□□□ -0.57
SNHG4-208ENST00000514110 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms