RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 HSD3B2P26439 372 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ITPKBP27987 946 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 BCL6P41182 706 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TSPAN7P41732 249 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ARSFP54793 590 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ITGA1P56199 1179 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 VSX2P58304 361 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 RAB15P59190 212 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ARF3P61204 181 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 SKP1P63208 163 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 YBX1P67809 324 aaKnown RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 MC2RQ01718 297 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 MEF2AQ02078 507 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TARDBPQ13148 414 aaKnown RBP eCLIP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 GRM7Q14831 915 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ZIC1Q15915 447 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 IMPG1Q17R60 797 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TMEM35AQ53FP2 167 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 WASHC2DQ5SRD0 308 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 YOD1Q5VVQ6 348 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 NIPAL1Q6NVV3 410 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 RNF44Q7L0R7 432 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ABHD13Q7L211 337 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 RAB11FIP2Q7L804 512 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 TMPRSS9Q7Z410 1059 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 PLD3Q8IV08 490 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 WDR75Q8IWA0 830 aaKnown RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 LSMEM2Q8N112 164 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 CSNK1A1LQ8N752 337 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 HUS1BQ8NHY5 278 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 WDR36Q8NI36 951 aaKnown RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 MTFMTQ96DP5 389 aaKnown RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 LIN37Q96GY3 246 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 C7orf26Q96N11 449 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 FCRL4Q96PJ5 515 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 OR2A5Q96R48 311 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 OR6C1Q96RD1 312 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 SERPINI1Q99574 410 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ZPBPQ9BS86 351 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ASPSCR1Q9BZE9 553 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 CCDC134Q9H6E4 229 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 BRF2Q9HAW0 419 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 FAM60AQ9NP50 221 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 FBXO8Q9NRD0 319 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 FGF21Q9NSA1 209 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 SLC39A1Q9NY26 324 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ZDHHC2Q9UIJ5 367 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 PILRAQ9UKJ1 303 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF490Q9ULM2 529 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-214ENST00000513989 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
NEDD9-214ENST00000513989 BOD1L1Q8NFC6 3051 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 SERTM1A2A2V5 107 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 NDUFS4O43181 175 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 RGS14O43566 566 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 PRAMEF10O60809 474 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 PRAMEF4O60810 478 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 CTSVO60911 334 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 VPS4BO75351 444 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 LYPLA1O75608 230 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 OR2B3O76000 313 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 TGDSO95455 350 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 TROVE2P10155 538 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 FOLR1P15328 257 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 CCR10P46092 362 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 NEK2P51955 445 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 EMP3P54852 163 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 OCRLQ01968 901 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 TUBB3Q13509 450 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 DDX39BQ13838 428 aaKnown RBP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 KCNAB1Q14722 419 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 DCAF12Q5T6F0 453 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 GARNL3Q5VVW2 1013 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 PRAMEF9Q5VWM5 478 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 CEACAM20Q6UY09 585 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 B3GNT8Q7Z7M8 397 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 PPP1R3BQ86XI6 285 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 DDIASQ8IXT1 998 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF781Q8N8C0 355 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 ZNF740Q8NDX6 193 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 PIWIL2Q8TC59 973 aaKnown RBP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 AGR3Q8TD06 166 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 QRFPRQ96P65 431 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 TEFMQ96QE5 360 aaKnown RBP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 TAAR9Q96RI9 348 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 MTERF1Q99551 399 aaKnown RBP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 NDC1Q9BTX1 674 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 ROGDIQ9GZN7 287 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 REXO4Q9GZR2 422 aaKnown RBP9.69□□□□□ -0.86
NEDD9-214ENST00000513989 RIC8BQ9NVN3 520 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 VPS29Q9UBQ0 182 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 PPT2Q9UMR5 302 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 FIS1Q9Y3D6 152 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 LOXL2Q9Y4K0 774 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 TIMM22Q9Y584 194 aa9.69□□□□□ -0.86
NEDD9-214ENST00000513989 MYO18BQ8IUG5 2567 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 LOC105369274A0A096LPK9 316 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 LOC102723532A0A0G2JNH3 316 aa9.68□□□□□ -0.86
NEDD9-214ENST00000513989 HYKKA2RU49 373 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms