RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 HTR6P50406 440 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ATP1A2P50993 1020 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 NEK2P51955 445 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 WDR4P57081 412 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ERVPABLB-1P60509 514 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 RAB8AP61006 207 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 OLR1P78380 273 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 HYAL2Q12891 473 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CLN3Q13286 438 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ZRSR2Q15696 482 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 TBCCQ15814 346 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 SGO1Q5FBB7 561 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 PAGE2BQ5JRK9 111 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 TCTE1Q5JU00 501 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CFAP157Q5JU67 520 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 GRHL2Q6ISB3 625 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 MED27Q6P2C8 311 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 TLDC1Q6P9B6 456 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CYB5D1Q6P9G0 228 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 C6orf15Q6UXA7 325 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ATG14Q6ZNE5 492 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 FRMD7Q6ZUT3 714 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 GPRIN3Q6ZVF9 776 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CACNA2D3Q8IZS8 1091 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 KRT78Q8N1N4 520 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ARHGEF39Q8N4T4 335 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 TBC1D19Q8N5T2 526 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CDYL2Q8N8U2 506 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 OR7G3Q8NG95 312 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 OR8K5Q8NH50 307 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 AGR3Q8TD06 166 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CREB3L4Q8TEY5 395 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CT55Q8WUE5 264 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 KCNE4Q8WWG9 221 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 SLC13A3Q8WWT9 602 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 MTFMTQ96DP5 389 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ZPBPQ9BS86 351 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 EFCAB11Q9BUY7 163 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 C1QTNF3Q9BXJ4 246 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CAPS2Q9BXY5 557 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 SPRY4Q9C004 299 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CHST8Q9H2A9 424 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 EHD1Q9H4M9 534 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 KLHL31Q9H511 634 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 SSU72Q9NP77 194 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 FARSBQ9NSD9 589 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ZFP69BQ9UJL9 534 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 CROTQ9UKG9 612 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 FIS1Q9Y3D6 152 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 TMEM184BQ9Y519 407 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ACTL7BQ9Y614 415 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 APC2O95996 2303 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
TOPBP1-209ENST00000513818 LOC101059948A0A1B0GTJ6 334 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TMEM233B4DJY2 109 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SGK494L7N484 410 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MEN1O00255 615 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TAF4O00268 1085 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 RTCAO00442 366 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TM9SF1O15321 606 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 KLK10O43240 276 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TRIM13O60858 407 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 LYPLA1O75608 230 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ZWINTO95229 277 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ETHE1O95571 254 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 OTCP00480 354 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 CAPN1P07384 714 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SLC35G6P0C7Q6 338 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 DHRS4L1P0CG22 281 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 WT1P19544 449 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 CXCR2P25025 360 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 FOXA1P55317 472 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 DNAJB13P59910 316 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 RPS18P62269 152 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 RPS13P62277 151 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MAT1AQ00266 395 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 RGS1Q08116 209 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 LCP2Q13094 533 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 E2F2Q14209 437 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SYT16Q17RD7 645 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ARHGAP40Q5TG30 622 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 HHATQ5VTY9 493 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 RHBDD2Q6NTF9 364 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 TMEM214Q6NUQ4 689 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 SCIMPQ6UWF3 145 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 FAM198BQ6UWH4 519 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 COX15Q7KZN9 410 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 MILR1Q7Z6M3 343 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 DTX1Q86Y01 620 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 PDSS2Q86YH6 399 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 LAS2Q8IYD9 372 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 DSELQ8IZU8 1212 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 NLGN4XQ8N0W4 816 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 IL22RA1Q8N6P7 574 aa9.32□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms