RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TRIP10Q15642 601 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 PGS1Q32NB8 556 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ADPRMQ3LIE5 342 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 TMEM35AQ53FP2 167 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CPTPQ5TA50 214 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 GLYATQ6IB77 296 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 OR4F3Q6IEY1 312 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ZNF425Q6IV72 752 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ERICH5Q6P6B1 374 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 IZUMO2Q6UXV1 221 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CYP2R1Q6VVX0 501 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 Q6ZS52 159 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 Q6ZSR6 202 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ERMP1Q7Z2K6 904 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 PAGE2Q7Z2X7 111 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 NRROSQ86YC3 692 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 KBTBD2Q8IY47 623 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ADGRG5Q8IZF4 528 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 TBC1D19Q8N5T2 526 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ANKFN1Q8N957 763 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ANKRD53Q8N9V6 530 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 LMNTD1Q8N9Z9 388 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ZNF740Q8NDX6 193 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ZNF548Q8NEK5 533 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 TSTD1Q8NFU3 115 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 OR2T12Q8NG77 320 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CLHC1Q8NHS4 586 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 C16orf78Q8WTQ4 265 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CANT1Q8WVQ1 401 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 SLC22A18Q96BI1 424 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 BIRC7Q96CA5 298 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 TOE1Q96GM8 510 aaKnown RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 NSMCE2Q96MF7 247 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ZNF570Q96NI8 536 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CDX2Q99626 313 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 PKP2Q99959 881 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ORAI3Q9BRQ5 295 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 EBPLQ9BY08 206 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ZNF717Q9BY31 904 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 OR51B5Q9H339 312 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 C6orf106Q9H6K1 298 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 LTB4R2Q9NPC1 389 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 OLAHQ9NV23 265 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CUEDC1Q9NWM3 386 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 SCHIP1Q9P0W5 487 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 ZNF624Q9P2J8 865 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 ANKMY1Q9P2S6 941 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 TBC1D29Q9UFV1 150 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 ANAPC2Q9UJX6 822 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 SNX7Q9UNH6 387 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CORO2BQ9UQ03 480 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 EXO1Q9UQ84 846 aaKnown RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 PCDHGA2Q9Y5H1 932 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 KLK4Q9Y5K2 254 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 CFAP20Q9Y6A4 193 aaKnown RBP8.02□□□□□ -1.13
RNF4-220ENST00000513578 CACNA1BQ00975 2339 aa8.02□□□□□ -1.13
RNF4-220ENST00000513578 EML5Q05BV3 1969 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 TP53BP1Q12888 1972 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 IGHV1OR15-9A0A0B4J2B8 117 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 IGKV1-8A0A0C4DH67 115 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 SPTY2D1-AS1A0A0U1RR47 76 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 GNG14A0A1W2PPG7 69 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 ELOVL7A1L3X0 281 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 OR52A4PA6NMU1 304 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 EVPLLA8MZ36 301 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 H0Y8X5 98 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 H7BY64 318 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CAPN5O15484 640 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 GMNNO75496 209 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 LAMP1P11279 417 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 PEX2P28328 305 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 TPP2P29144 1249 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 PEBP1P30086 187 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 BSGP35613 385 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 GRK3P35626 688 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 SLC19A1P41440 591 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 TSFMP43897 325 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 HSPA13P48723 471 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 ERFP50548 548 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 ILF3Q12906 894 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNF4-220ENST00000513578 GAS6Q14393 721 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 KIR2DS3Q14952 304 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 RBBP5Q15291 538 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 SKIV2LQ15477 1246 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 CCDC85BQ15834 202 aaPredicted RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 SFT2D3Q587I9 215 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 TJAP1Q5JTD0 557 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 LPCAT4Q643R3 524 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CPZQ66K79 652 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 IRGCQ6NXR0 463 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 IYDQ6PHW0 289 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 IQCHQ86VS3 1027 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 AMIGO1Q86WK6 493 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 SPPL2CQ8IUH8 684 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 RBM12BQ8IXT5 1001 aaKnown RBP8.01□□□□□ -1.13
RNF4-220ENST00000513578 MICU2Q8IYU8 434 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 DTWD1Q8N5C7 304 aa8.01□□□□□ -1.13
RNF4-220ENST00000513578 CAMKK1Q8N5S9 505 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms