RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CTSL3PQ5NE16 218 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 PAOXQ6QHF9 649 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 CXXC5Q7LFL8 322 aaKnown RBP10.23□□□□□ -0.77
DDX41-216ENST00000513562 KRTAP1-3Q8IUG1 177 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 LIX1LQ8IVB5 337 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 ACRBPQ8NEB7 543 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 OR10Q1Q8NGQ4 319 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 CREB3L4Q8TEY5 395 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 ZNF480Q8WV37 535 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 NUDT8Q8WV74 236 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 PKP4Q99569 1192 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 ANKHQ9HCJ1 492 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 FAM114A2Q9NRY5 505 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 Q9UFV3 132 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
DDX41-216ENST00000513562 ANAPC5Q9UJX4 755 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 FAM215AQ9Y5M1 114 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 FN1P02751 2386 aaKnown RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 FEZF1A0PJY2 475 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 OR14I1A6ND48 311 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 SAGE2PA6NJ88 616 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 ERI2A8K979 691 aaKnown RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 FAM171A2A8MVW0 826 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 NPIPA2E9PIF3 369 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 NPIPA3F8WFD2 350 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 H7BY64 318 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 SMAPO00193 183 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 CD3EAPO15446 510 aaKnown RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 TJP3O95049 919 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 GAS8O95995 478 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 ADH7P40394 386 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 EIF3BP55884 814 aaKnown RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 RPS15AP62244 130 aaKnown RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 TRIM14Q14142 442 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 RTL6Q6ICC9 239 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 B3GNT6Q6ZMB0 384 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 MDGA2Q7Z553 956 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 LRRC56Q8IYG6 542 aaPredicted RBP10.22□□□□□ -0.77
DDX41-216ENST00000513562 CYP4Z2PQ8N1L4 340 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 MPP5Q8N3R9 675 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 OR5M9Q8NGP3 310 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 ZCCHC10Q8TBK6 192 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 PEX11GQ96HA9 241 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 CCDC138Q96M89 665 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 PRAP1Q96NZ9 151 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 BIRC8Q96P09 236 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 GBP4Q96PP9 640 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 MACROD1Q9BQ69 325 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 SARGQ9BW04 601 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 DEFB127Q9H1M4 99 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 ZDHHC11Q9H8X9 412 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 DMRT3Q9NQL9 472 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 CBLCQ9ULV8 474 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 PCDHA3Q9Y5H8 950 aa10.22□□□□□ -0.77
DDX41-216ENST00000513562 BCKDKO14874 412 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 CATP04040 527 aaKnown RBP10.21□□□□□ -0.77
DDX41-216ENST00000513562 FHP07954 510 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 GRIA1P42261 906 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 KEAP1Q14145 624 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 FLYWCH1Q4VC44 716 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 ACSBG2Q5FVE4 666 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 MEI1Q5TIA1 1274 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 AADACL2Q6P093 401 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 PPP1R21Q6ZMI0 780 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 KCT2Q8NC54 265 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 CAMKVQ8NCB2 501 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 FBXO15Q8NCQ5 510 aaPredicted RBP10.21□□□□□ -0.77
DDX41-216ENST00000513562 NFAM1Q8NET5 270 aaPredicted RBP10.21□□□□□ -0.77
DDX41-216ENST00000513562 OR5T3Q8NGG3 340 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 FAM222BQ8WU58 562 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 TBC1D20Q96BZ9 403 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 TM4SF19Q96DZ7 209 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 PANX2Q96RD6 677 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 SMC6Q96SB8 1091 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 DEFB126Q9BYW3 111 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 DEPPQ9NTK1 212 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 TMEM184CQ9NVA4 438 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 NAALAD2Q9Y3Q0 740 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 SLC22A7Q9Y694 548 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 DUSP10Q9Y6W6 482 aa10.21□□□□□ -0.77
DDX41-216ENST00000513562 PINLYPA6NC86 204 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 ZNF860A6NHJ4 632 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 FAM47E-STBD1D6RA91 191 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 ACOT7O00154 380 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 MFAP3LO75121 409 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 NIPSNAP2O75323 286 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 NDUFS3O75489 264 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 IGHG3P01860 377 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 TUBB4AP04350 444 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 JAK1P23458 1154 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 HRH2P25021 359 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 RWDD2BP57060 319 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 PPIAP62937 165 aaKnown RBP10.2□□□□□ -0.78
DDX41-216ENST00000513562 MEF2AQ02078 507 aaPredicted RBP10.2□□□□□ -0.78
DDX41-216ENST00000513562 KCNJ11Q14654 390 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 DAZAP2Q15038 168 aaPredicted RBP10.2□□□□□ -0.78
DDX41-216ENST00000513562 JMJD1CQ15652 2540 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms