RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 XCR1P46094 333 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 CYB561P49447 251 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ST13P50502 369 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ANKRD20A4Q4UJ75 823 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 PAPD4Q6PIY7 484 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 SUSD1Q6UWL2 747 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 RPS19BP1Q86WX3 136 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 CREG2Q8IUH2 290 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 PRELID2Q8N945 189 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 MYRIPQ8NFW9 859 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ACTRT1Q8TDG2 376 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF592Q92610 1267 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 WNT2BQ93097 391 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 TMEM125Q96AQ2 219 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ALPK1Q96QP1 1244 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 PRR14Q9BWN1 585 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 P2RY12Q9H244 342 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 PCYOX1Q9UHG3 505 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 RUVBL2Q9Y230 463 aaKnown RBP13.07□□□□□ -0.32
SPCS3-204ENST00000513139 ARHGAP21Q5T5U3 1957 aa13.07□□□□□ -0.32
SPCS3-204ENST00000513139 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF839A8K0R7 811 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 PGRMC1O00264 195 aaKnown RBP13.06□□□□□ -0.32
SPCS3-204ENST00000513139 CES2O00748 559 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 NDC80O14777 642 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 PRMT3O60678 531 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 CTAG2O75638 210 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.322e-7■□□□□ 8.5
SPCS3-204ENST00000513139 ATP5DP30049 168 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 KCNJ1P48048 391 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ABATP80404 500 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ACTN3Q08043 901 aaPredicted RBP13.06□□□□□ -0.32
SPCS3-204ENST00000513139 USP10Q14694 798 aaKnown RBP13.06□□□□□ -0.32
SPCS3-204ENST00000513139 OASLQ15646 514 aaKnown RBP13.06□□□□□ -0.32
SPCS3-204ENST00000513139 CEBPEQ15744 281 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 CCNG2Q16589 344 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 SFT2D3Q587I9 215 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF468Q5VIY5 522 aaPredicted RBP13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ARHGAP11AQ6P4F7 1023 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 PRUNE1Q86TP1 453 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF227Q86WZ6 799 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 PLPP5Q8NEB5 264 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 OR52K1Q8NGK4 314 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 C16orf52Q8NHV5 167 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ELP5Q8TE02 316 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF778Q96MU6 729 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 CATSPERZQ9NTU4 200 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 TAC3Q9UHF0 121 aa13.06□□□□□ -0.32
SPCS3-204ENST00000513139 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
SPCS3-204ENST00000513139 EML6Q6ZMW3 1958 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 KCNE1BA0A087WTH5 132 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 KLRC4-KLRK1H3BQV0 150 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 MYO1CO00159 1063 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 TFEBP19484 476 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 IL10P22301 178 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
SPCS3-204ENST00000513139 TRHRP34981 398 aaPredicted RBP13.05□□□□□ -0.32
SPCS3-204ENST00000513139 BCL6P41182 706 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 GDF10P55107 478 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 SLC26A5P58743 744 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 MPP1Q00013 466 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 GBX1Q14549 363 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 ABRAXAS2Q15018 415 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 NSDHLQ15738 373 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 CMPK2Q5EBM0 449 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 LDB1Q86U70 411 aaPredicted RBP13.05□□□□□ -0.32
SPCS3-204ENST00000513139 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 MPP5Q8N3R9 675 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 MAIP1Q8WWC4 291 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 SEC16BQ96JE7 1060 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
SPCS3-204ENST00000513139 FAM114A2Q9NRY5 505 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF358Q9NW07 568 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 ZNF148Q9UQR1 794 aa13.05□□□□□ -0.32
SPCS3-204ENST00000513139 OR2W5A6NFC9 320 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 ARHGEF33A8MVX0 844 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 MAGEB17A8MXT2 336 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 HAT1O14929 419 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 CD3EAPO15446 510 aaKnown RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 PSIP1O75475 530 aaKnown RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 ETS1P14921 441 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 DNASE1P24855 282 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 MEOX1P50221 254 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 HLCSP50747 726 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 PNLIPRP1P54315 467 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 SNRPNP63162 240 aaKnown RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 ADAM8P78325 824 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 RHAGQ02094 409 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 LTBQ06643 244 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 PMPCAQ10713 525 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 TTC27Q6P3X3 843 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms