RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 ATXN7L1Q9ULK2 861 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-204ENST00000512707 PLCL2Q9UPR0 1127 aa10.39□□□□□ -0.75
PFDN1-204ENST00000512707 TMED5Q9Y3A6 229 aa10.39□□□□□ -0.75
PFDN1-204ENST00000512707 PCDHGA1Q9Y5H4 931 aa10.39□□□□□ -0.75
PFDN1-204ENST00000512707 CABIN1Q9Y6J0 2220 aa10.39□□□□□ -0.75
PFDN1-204ENST00000512707 IGHV5-51A0A0C4DH38 117 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ATP6AP2A0A1C7CYW4 349 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 A0A1W2PQM1 296 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 A8MU76 341 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 MAGEB17A8MXT2 336 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SDHDO14521 159 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ZSCAN9O15535 394 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 KIF1CO43896 1103 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 GDF9O60383 454 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 CCDC22O60826 627 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 CBFA2T3O75081 653 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SEC22BO75396 215 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ATP6AP2O75787 350 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SEMA3DO95025 777 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SERPINA6P08185 405 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 LSSP48449 732 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SEPHS1P49903 392 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 STX1BP61266 288 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 RPS13P62277 151 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SKP1P63208 163 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ACSM2AQ08AH3 577 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SF3A3Q12874 501 aaKnown RBP eCLIP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 CUL3Q13618 768 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 TRIP6Q15654 476 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 GALNTL6Q49A17 601 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SLC9B1Q4ZJI4 515 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 TCTE1Q5JU00 501 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 VWA5B1Q5TIE3 1220 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 KHDRBS2Q5VWX1 349 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ACSM2BQ68CK6 577 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SCIMPQ6UWF3 145 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 RBM44Q6ZP01 1051 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SPATA19Q7Z5L4 167 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 PIP4P1Q86T03 277 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 MCATQ8IVS2 390 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ANKRD53Q8N9V6 530 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 FNDC5Q8NAU1 212 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 C10orf82Q8WW14 230 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 MAELQ96JY0 434 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 PPM1MQ96MI6 270 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 HBEGFQ99075 208 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ACPTQ9BZG2 426 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 STRADBQ9C0K7 418 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 ROGDIQ9GZN7 287 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 SPNS1Q9H2V7 528 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 TUBB1Q9H4B7 451 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 WDR55Q9H6Y2 383 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 LRTM1Q9HBL6 345 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 PILRAQ9UKJ1 303 aa10.38□□□□□ -0.75
PFDN1-204ENST00000512707 EIF3LQ9Y262 564 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 CNOT1A5YKK6 2376 aaKnown RBP10.38□□□□□ -0.75
PFDN1-204ENST00000512707 IGHV5-10-1A0A0J9YXX1 117 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ARHGAP10A1A4S6 786 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NTN3O00634 580 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ZNF195O14628 629 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 LSM1O15116 133 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 UBDO15205 165 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 LCMT2O60294 686 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 CTSVO60911 334 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 PEX11AO75192 247 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 TGFB1P01137 390 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 EIF2S1P05198 315 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 JUNP05412 331 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 THRAP10827 490 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NELFEP18615 380 aaKnown RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NCF2P19878 526 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 PRPH2P23942 346 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 CSTF2P33240 577 aaKnown RBP eCLIP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ARFIP1P53367 373 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 VSX2P58304 361 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ERVK-8P63133 956 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 HMGCS1Q01581 520 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ACY1Q03154 408 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 RPS6KA2Q15349 733 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ZIC1Q15915 447 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NDUFA9Q16795 377 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 AP5B1Q2VPB7 878 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 OGFOD2Q6N063 350 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NIPAL1Q6NVV3 410 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 FBXO42Q6P3S6 717 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 TRIM40Q6P9F5 258 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ABHD13Q7L211 337 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 MAVSQ7Z434 540 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 GLRX5Q86SX6 157 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 ZFAND4Q86XD8 727 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 GPR135Q8IZ08 494 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 CSNK1A1LQ8N752 337 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 TTC29Q8NA56 475 aaPredicted RBP10.37□□□□□ -0.75
PFDN1-204ENST00000512707 NT5CQ8TCD5 201 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 KLHL6Q8WZ60 621 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 RGMAQ96B86 450 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 SLC41A2Q96JW4 573 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 CCDC74BQ96LY2 380 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 KCNC2Q96PR1 638 aa10.37□□□□□ -0.75
PFDN1-204ENST00000512707 OR2A5Q96R48 311 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms