RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FGGP02679 453 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 SERPINA7P05543 415 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 HEXBP07686 556 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 ERGP11308 486 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 ENO3P13929 434 aaPredicted RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 EZRP15311 586 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 OGNP20774 298 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 MGAT1P26572 445 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 AVPR1BP47901 424 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PNLIPRP1P54315 467 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 ETF1P62495 437 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 PRDX1Q06830 199 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 TSTA3Q13630 321 aaPredicted RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 GBX1Q14549 363 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 NDUFA9Q16795 377 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PRTGQ2VWP7 1150 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 CCSMST1Q4G0I0 132 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 WIPI1Q5MNZ9 446 aaPredicted RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 CTSL3PQ5NE16 218 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 KIAA0930Q6ICG6 404 aaPredicted RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 NEPROQ6NW34 567 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 FBXO42Q6P3S6 717 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 CASC4Q6P4E1 433 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 NEK10Q6ZWH5 1172 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PAQR7Q86WK9 346 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 TMEM151BQ8IW70 566 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 CSNK1A1LQ8N752 337 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 SPC24Q8NBT2 197 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 OR1N1Q8NGS0 311 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 SUN3Q8TAQ9 357 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 METTL21AQ8WXB1 218 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 MFSD3Q96ES6 412 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 MMABQ96EY8 250 aaPredicted RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 MAGEB10Q96LZ2 347 aaPredicted RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 BIRC8Q96P09 236 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 ACAT2Q9BWD1 397 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 TGIF2Q9GZN2 237 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 DRC3Q9H069 523 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 CCDC68Q9H2F9 335 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 OLAHQ9NV23 265 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 INTS10Q9NVR2 710 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 SYBUQ9NX95 663 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PTGFRNQ9P2B2 879 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 KLHL42Q9P2K6 505 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 TEKT2Q9UIF3 430 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 RUVBL2Q9Y230 463 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 CRYL1Q9Y2S2 319 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 MRPS2Q9Y399 296 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 CSAG2Q9Y5P2 127 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PCM1Q15154 2024 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 CCDC88CQ9P219 2028 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 MDC1Q14676 2089 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 DOCK10Q96BY6 2186 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 CTAGE9A4FU28 777 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 GOLGA8KD6RF30 607 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 GOLGA8TH3BQL2 631 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 E2F3O00716 465 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 HNRNPRO43390 633 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 ZBTB14O43829 449 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 JRKO75564 520 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 KLHL18O94889 574 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 CRYABP02511 175 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 CYC1P08574 325 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 STSP08842 583 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 PRR35P0CG20 571 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 COX6A1P12074 109 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 MLNP12872 115 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 HRH2P25021 359 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 SLC26A3P40879 764 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 TNFSF10P50591 281 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 Q0VFX4 171 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 THOC5Q13769 683 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 FAM53BQ14153 422 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 FASTKQ14296 549 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 SIX1Q15475 284 aaPredicted RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 ZRSR2Q15696 482 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 LONRF1Q17RB8 773 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 KLHL38Q2WGJ6 581 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 VWA2Q5GFL6 755 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 THEMIS2Q5TEJ8 643 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 ABHD17BQ5VST6 288 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 ICE2Q659A1 982 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 LETMD1Q6P1Q0 360 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 MTFR2Q6P444 385 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 SUSD1Q6UWL2 747 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 CES3Q6UWW8 571 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 ADCK2Q7Z695 626 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 CILP2Q8IUL8 1156 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 LMNTD2Q8IXW0 634 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 FBXO15Q8NCQ5 510 aaPredicted RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 TRIM58Q8NG06 486 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 GABPB2Q8TAK5 448 aaPredicted RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 MCOLN3Q8TDD5 553 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 HAS2Q92819 552 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 FAM136AQ96C01 138 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 C8orf44Q96CB5 159 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 C10orf90Q96M02 699 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms