RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PDSS2Q86YH6 399 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 ZC3H7AQ8IWR0 971 aaKnown RBP13.25□□□□□ -0.29
DDX41-212ENST00000511040 NT5CQ8TCD5 201 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 UBLCP1Q8WVY7 318 aaPredicted RBP13.25□□□□□ -0.29
DDX41-212ENST00000511040 CCT6BQ92526 530 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 ISL2Q96A47 359 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 SARGQ9BW04 601 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 KLHL31Q9H511 634 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 GPRC5BQ9NZH0 403 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX41-212ENST00000511040 C3orf18Q9UK00 162 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 FBXL4Q9UKA2 621 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 NAALAD2Q9Y3Q0 740 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 HS3ST3B1Q9Y662 390 aa13.25□□□□□ -0.29
DDX41-212ENST00000511040 V9GYY5 206 aaPredicted RBP13.25□□□□□ -0.29
DDX41-212ENST00000511040 IGLV3-12A0A075B6K2 115 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 SYCE1LA8MT33 242 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 SOCS6O14544 535 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 DNAJB6O75190 326 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 NSA2O95478 260 aaKnown RBP13.24□□□□□ -0.29
DDX41-212ENST00000511040 PDGFAP04085 211 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 SHBGP04278 402 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 CD22P20273 847 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 AHRP35869 848 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 EMP2P54851 167 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 RAB8AP61006 207 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 OLR1P78380 273 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 PWP1Q13610 501 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 DOC2AQ14183 400 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 DEFB134Q4QY38 66 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 LACTB2Q53H82 288 aaPredicted RBP13.24□□□□□ -0.29
DDX41-212ENST00000511040 TECRLQ5HYJ1 363 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 ADNP2Q6IQ32 1131 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 KIRREL2Q6UWL6 708 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 TMIGD1Q6UXZ0 262 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 TEX9Q8N6V9 391 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 EIF1ADQ8N9N8 165 aaKnown RBP13.24□□□□□ -0.29
DDX41-212ENST00000511040 OR5T3Q8NGG3 340 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 RHEBL1Q8TAI7 183 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 CREB3L4Q8TEY5 395 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 UBTD2Q8WUN7 234 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 C8orf44Q96CB5 159 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 SLC25A23Q9BV35 468 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 RBCK1Q9BYM8 510 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 MKKSQ9NPJ1 570 aaPredicted RBP13.24□□□□□ -0.29
DDX41-212ENST00000511040 OPTCQ9UBM4 332 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 MAP4K5Q9Y4K4 846 aa13.24□□□□□ -0.29
DDX41-212ENST00000511040 TNRC6AQ8NDV7 1962 aaKnown RBP13.23□□□□□ -0.29
DDX41-212ENST00000511040 OR2W5A6NFC9 320 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 SMIM23A6NLE4 172 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 FOXO6A8MYZ6 492 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 IDSB3KWA1 339 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 H0YIG0 161 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 K7EPI3 171 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 SIX3O95343 332 aaPredicted RBP13.23□□□□□ -0.29
DDX41-212ENST00000511040 HEXBP07686 556 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 CXCR2P25025 360 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 TNFRSF8P28908 595 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 RRADP55042 308 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 VSNL1P62760 191 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 IRF8Q02556 426 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 HYAL2Q12891 473 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 CHIT1Q13231 466 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 HERC3Q15034 1050 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 DCAF10Q5QP82 559 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 LGSNQ5TDP6 509 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 MFSD4BQ5TF39 518 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 ADGRD1Q6QNK2 874 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 MED25Q71SY5 747 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 KRT78Q8N1N4 520 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 AFAP1L2Q8N4X5 818 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 TMEM102Q8N9M5 508 aaPredicted RBP13.23□□□□□ -0.29
DDX41-212ENST00000511040 FDCSPQ8NFU4 85 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 OR51Q1Q8NH59 317 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 UTP15Q8TED0 518 aaKnown RBP13.23□□□□□ -0.29
DDX41-212ENST00000511040 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 IP6K3Q96PC2 410 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 CAPS2Q9BXY5 557 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 AICDAQ9GZX7 198 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 SEMA3GQ9NS98 782 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 XPR1Q9UBH6 696 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 ANGPTL3Q9Y5C1 460 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 SLC22A7Q9Y694 548 aa13.23□□□□□ -0.29
DDX41-212ENST00000511040 A0A0G2JN53 185 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 C4orf51C9J302 202 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 GOLGA8RI6L899 631 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 AGPSO00116 658 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
DDX41-212ENST00000511040 SLU7O95391 586 aaKnown RBP13.22□□□□□ -0.29
DDX41-212ENST00000511040 BMP10O95393 424 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 IGHEP01854 428 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 RBP1P09455 135 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 ALOX12P18054 663 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 XCR1P46094 333 aa13.22□□□□□ -0.29
DDX41-212ENST00000511040 SLCO1A2P46721 670 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms