RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MSX1P28360 303 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 NPY2RP49146 381 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 TAP2Q03519 686 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 SNX1Q13596 522 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 CTSL3PQ5NE16 218 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 FBXW10Q5XX13 1052 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 KIAA1328Q86T90 577 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 ASPGQ86U10 573 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 REXO1L1PQ8IX06 675 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 SYCE1Q8N0S2 351 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 KIF2BQ8N4N8 673 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 MARVELD2Q8N4S9 558 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 TBC1D19Q8N5T2 526 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 SLC35B2Q8TB61 432 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 ATG4AQ8WYN0 398 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 NINJ1Q92982 152 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 RMND5BQ96G75 393 aaPredicted RBP9.71□□□□□ -0.86
MBD4-208ENST00000509828 SEC16BQ96JE7 1060 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 PWWP2AQ96N64 755 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 OR1F2PQ96R84 312 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 TCF12Q99081 682 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 TIMMDC1Q9NPL8 285 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 CCDC177Q9NQR7 707 aaPredicted RBP9.71□□□□□ -0.86
MBD4-208ENST00000509828 FBXW2Q9UKT8 454 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 ERVK-11Q9UQG0 969 aa9.71□□□□□ -0.86
MBD4-208ENST00000509828 NIPBLQ6KC79 2804 aaeCLIP9.71□□□□□ -0.86
MBD4-208ENST00000509828 ZFHX3Q15911 3703 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 NAV3Q8IVL0 2385 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 KCNE1BA0A087WTH5 132 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 FEZF1A0PJY2 475 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 CTAGE9A4FU28 777 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 PABPN1LA6NDY0 278 aaKnown RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 TMEM200CA6NKL6 621 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 NPIPA2E9PIF3 369 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 NPIPA3F8WFD2 350 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 ACOT7O00154 380 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 PSMD12O00232 456 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 FHP07954 510 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 ETS1P14921 441 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 IGFBP2P18065 325 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 NUP107P57740 925 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 MLF1P58340 268 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 GPR85P60893 370 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 MPP1Q00013 466 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 MEF2AQ02078 507 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 RHAGQ02094 409 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 KCNJ11Q14654 390 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 HERC3Q15034 1050 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 CAPN13Q6MZZ7 669 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 TMEM214Q6NUQ4 689 aaKnown RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 ZNF585AQ6P3V2 769 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 CES3Q6UWW8 571 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 SLC26A11Q86WA9 606 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 C17orf64Q86WR6 236 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 CHERPQ8IWX8 916 aaKnown RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 PALM2Q8IXS6 379 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 ZZZ3Q8IYH5 903 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 CYP4Z2PQ8N1L4 340 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 ARHGEF39Q8N4T4 335 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 KCT2Q8NC54 265 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 ELP5Q8TE02 316 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 TBC1D20Q96BZ9 403 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 BIRC8Q96P09 236 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 FAM129AQ9BZQ8 928 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 IL22Q9GZX6 179 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 PCBD2Q9H0N5 130 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 RHBGQ9H310 441 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 GSX1Q9H4S2 264 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 ALKBH4Q9NXW9 302 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 PAK5Q9P286 719 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 PACSIN2Q9UNF0 486 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 VPS9D1Q9Y2B5 631 aa9.7□□□□□ -0.86
MBD4-208ENST00000509828 EPN1Q9Y6I3 576 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 NCOA6Q14686 2063 aaPredicted RBP9.7□□□□□ -0.86
MBD4-208ENST00000509828 TCRBV7S2A1N4TA0A589 114 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 CHST10O43529 356 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 LIASO43766 372 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 KLK8O60259 260 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 FOSL1P15407 271 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 PAMP19021 973 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 TRHRP34981 398 aaPredicted RBP9.69□□□□□ -0.86
MBD4-208ENST00000509828 ZFP36L2P47974 494 aaKnown RBP9.69□□□□□ -0.86
MBD4-208ENST00000509828 PPIAP62937 165 aaKnown RBP9.69□□□□□ -0.86
MBD4-208ENST00000509828 BASP1P80723 227 aaKnown RBP9.69□□□□□ -0.86
MBD4-208ENST00000509828 HYAL2Q12891 473 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 FOXD4Q12950 439 aaPredicted RBP9.69□□□□□ -0.86
MBD4-208ENST00000509828 CUL1Q13616 776 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 GXYLT1Q4G148 440 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 CMPK2Q5EBM0 449 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 SEL1L2Q5TEA6 688 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 CASC4Q6P4E1 433 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 ARSKQ6UWY0 536 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 UBE2R2Q712K3 238 aaPredicted RBP9.69□□□□□ -0.86
MBD4-208ENST00000509828 GSTA5Q7RTV2 222 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 PCGF5Q86SE9 256 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 PRUNE1Q86TP1 453 aa9.69□□□□□ -0.86
MBD4-208ENST00000509828 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms