RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 RBBP9O75884 186 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 IFNW1P05000 195 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FHP07954 510 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ELFN1P0C7U0 828 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SPI1P17947 270 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 AOC1P19801 751 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 EFNA1P20827 205 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 FPR1P21462 350 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 NFYAP23511 347 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC6A2P23975 617 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ITGB8P26012 769 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HTR2CP28335 458 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 IMPA1P29218 277 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 BMI1P35226 326 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GNALP38405 381 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ALDH7A1P49419 539 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SCNN1GP51170 649 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CDH12P55289 794 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ARPP19P56211 112 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RBP5P82980 135 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 HMGCS1Q01581 520 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TARDBPQ13148 414 aaKnown RBP eCLIP3.48□□□□□ -1.85
USP53-205ENST00000509769 ADIRFQ15847 76 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 IRAK1BP1Q5VVH5 260 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 DCAF15Q66K64 600 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 H3F3CQ6NXT2 135 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 TMEM270Q6UE05 265 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 C16orf86Q6ZW13 317 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 USP45Q70EL2 814 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SHFQ7M4L6 423 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZER1Q7Z7L7 766 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 OR6V1Q8N148 313 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 ZNF619Q8N2I2 560 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 SYNPOQ8N3V7 929 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 MS4A15Q8N5U1 240 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 UBR7Q8N806 425 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 LMNTD1Q8N9Z9 388 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GPR156Q8NFN8 814 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 C1orf216Q8TAB5 229 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RELTQ969Z4 430 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 PTERQ96BW5 349 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RASD2Q96D21 266 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FCRL3Q96P31 734 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 INPP4AQ96PE3 977 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 TSSK3Q96PN8 268 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 GAS2L1Q99501 681 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 FAM126AQ9BYI3 521 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 ERVK-5Q9HDB9 667 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FAM212BQ9NTI7 297 aaPredicted RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 SLC38A7Q9NVC3 462 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 BET1LQ9NYM9 111 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 FLRT1Q9NZU1 646 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 RALYQ9UKM9 306 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 FBXL21Q9UKT6 434 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 STRAPQ9Y3F4 350 aaKnown RBP3.48□□□□□ -1.85
USP53-205ENST00000509769 MMP24Q9Y5R2 645 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 CEPT1Q9Y6K0 416 aa3.48□□□□□ -1.85
USP53-205ENST00000509769 KRBA1A5PL33 1030 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 GGT3PA6NGU5 568 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 METTL15A6NJ78 407 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 APOC4-APOC2K7ER74 178 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 M0R2Z0 102 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 ARVCFO00192 962 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 SGPL1O95470 568 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 CPSF4O95639 269 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 EGFP01133 1207 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 APOC2P02655 101 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 MT-ND4LP03901 98 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 CHRM5P08912 532 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 MBL2P11226 248 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 ZNF37AP17032 561 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 KLRC1P26715 233 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 TLX1P31314 330 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 HNRNPH3P31942 346 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 GGT2P36268 569 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 HSPA7P48741 367 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 SCNN1DP51172 638 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 NDUFA6P56556 154 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 ERVK-9P63128 1117 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 CACNB2Q08289 660 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 ACSM2AQ08AH3 577 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 CDC20Q12834 499 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 PTP4A2Q12974 167 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 VAMP3Q15836 100 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 ACOT6Q3I5F7 207 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 TCTE1Q5JU00 501 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 SAPCD1Q5SSQ6 148 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 ACSM2BQ68CK6 577 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 OVOS1Q6IE37 1185 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 FIP1L1Q6UN15 594 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 TMEM205Q6UW68 189 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 KIAA1324Q6UXG2 1013 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 GDPD4Q6W3E5 623 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 RTL4Q6ZR62 310 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 DCXRQ7Z4W1 244 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 CREG2Q8IUH2 290 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 SYT12Q8IV01 421 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 DENND1CQ8IV53 801 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 ZNF547Q8IVP9 402 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 RASGEF1CQ8N431 466 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms