RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FAM98AQ8NCA5 519 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ARMC2Q8NEN0 867 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 NT5CQ8TCD5 201 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 SLC5A11Q8WWX8 675 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ANP32BQ92688 251 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 SEC16BQ96JE7 1060 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 AIF1LQ9BQI0 150 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 CAPS2Q9BXY5 557 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 PELI2Q9HAT8 420 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 KCNK13Q9HB14 408 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 HCN3Q9P1Z3 774 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ZFATQ9P243 1243 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 ZFP69BQ9UJL9 534 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 KCNE2Q9Y6J6 123 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 NOTCH2Q04721 2471 aa12.83□□□□□ -0.36
CCHCR1-227ENST00000508852 A8MUI8 341 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TTI1O43156 1089 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 LCMT2O60294 686 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 SEC24DO94855 1032 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TSPAN12O95859 305 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 FHP07954 510 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 RNF224P0DH78 156 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 CD46P15529 392 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 IVDP26440 423 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 MGAT5Q09328 741 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 ABRAXAS2Q15018 415 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 PHKG1Q16816 387 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 ZNF766Q5HY98 468 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 ACER2Q5QJU3 275 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TMEM207Q6UWW9 146 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TMEM178AQ8NBL3 297 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 KCT2Q8NC54 265 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TTLQ8NG68 377 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 ZCCHC10Q8TBK6 192 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TBC1D20Q96BZ9 403 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 CFAP36Q96G28 342 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 MESP1Q9BRJ9 268 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 UTP23Q9BRU9 249 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 PITHD1Q9GZP4 211 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 SEC14L3Q9UDX4 400 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 SAR1BQ9Y6B6 198 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 TEX264Q9Y6I9 313 aa12.82□□□□□ -0.36
CCHCR1-227ENST00000508852 A0A088AWK7 358 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 PSMD12O00232 456 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 H2AFYO75367 372 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 RDH16O75452 317 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 F7P08709 466 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 ZNF10P21506 573 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 DCTP40126 519 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 SCTRP47872 440 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 TDGF1P3P51864 188 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 OR4D2P58180 307 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 RHAGQ02094 409 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 CBLBQ13191 982 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 KCTD19Q17RG1 926 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 MSS51Q4VC12 460 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 KRTCAP3Q53RY4 240 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 SFT2D3Q587I9 215 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 PAPD4Q6PIY7 484 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 MBOAT1Q6ZNC8 495 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 QSOX2Q6ZRP7 698 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 ADAMTSL2Q86TH1 951 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 ZNF740Q8NDX6 193 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 C7orf57Q8NEG2 295 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 PEX11GQ96HA9 241 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 CHMP2BQ9UQN3 213 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 ENTPD4Q9Y227 616 aa12.81□□□□□ -0.36
CCHCR1-227ENST00000508852 ENO4A6NNW6 628 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 HNRNPRO43390 633 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 PRMT3O60678 531 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 SEC31AO94979 1220 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 GUCA1CO95843 209 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 SERPIND1P05546 499 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 SERPINA6P08185 405 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 ZNF37AP17032 561 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 GNAZP19086 355 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 SLC12A2P55011 1212 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 STXBP1P61764 594 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 USP10Q14694 798 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 SBSNQ6UWP8 590 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 LANCL3Q6ZV70 420 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 FRA10AC1Q70Z53 315 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 PDSS2Q86YH6 399 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 IGDCC3Q8IVU1 814 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 TCAIMQ8N3R3 496 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 ADAMTS18Q8TE60 1221 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 CDKL2Q92772 493 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 NEIL2Q969S2 332 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 PYCR2Q96C36 320 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 TAAR6Q96RI8 345 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 NAPGQ99747 312 aaPredicted RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 CNOT10Q9H9A5 744 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 TRMT1Q9NXH9 659 aaKnown RBP12.8□□□□□ -0.36
CCHCR1-227ENST00000508852 COPG2Q9UBF2 871 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms