RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ANKUB1A6NFN9 424 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 E2F3O00716 465 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 SERPIND1P05546 499 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 OLR1P78380 273 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
RAB28-205ENST00000508274 TMPRSS11BQ86T26 416 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 THOC6Q86W42 341 aaKnown RBP13.48□□□□□ -0.25
RAB28-205ENST00000508274 NKAPQ8N5F7 415 aaKnown RBP13.48□□□□□ -0.25
RAB28-205ENST00000508274 SPATA4Q8NEY3 305 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 METTL21AQ8WXB1 218 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 PEX11GQ96HA9 241 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 RHOJQ9H4E5 214 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 CAB39LQ9H9S4 337 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 GRHL1Q9NZI5 618 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 ERRFI1Q9UJM3 462 aaPredicted RBP13.48□□□□□ -0.25
RAB28-205ENST00000508274 SLC22A14Q9Y267 594 aa13.48□□□□□ -0.25
RAB28-205ENST00000508274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB28-205ENST00000508274 POLEQ07864 2286 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 FAM187AA6NFU0 413 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 PCDH17O14917 1159 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 UQCRHP07919 91 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 REEP5Q00765 189 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 CBLBQ13191 982 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 CSHL1Q14406 222 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 TSNQ15631 228 aaKnown RBP13.47□□□□□ -0.25
RAB28-205ENST00000508274 DEFB134Q4QY38 66 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 RIPOR1Q6ZS17 1223 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 ANKRD37Q7Z713 158 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 SPATA6LQ8N4H0 392 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 AFAP1L2Q8N4X5 818 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 ANKRD53Q8N9V6 530 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 BBOF1Q8ND07 529 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 OR1N1Q8NGS0 311 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 PYROXD1Q8WU10 500 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 EGFL8Q99944 293 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 GPAMQ9HCL2 828 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 AGPAT4Q9NRZ5 378 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 LANCL2Q9NS86 450 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 WHRNQ9P202 907 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 OARD1Q9Y530 152 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 SLC22A7Q9Y694 548 aa13.47□□□□□ -0.25
RAB28-205ENST00000508274 A1L4Q6 167 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 DYTNA2CJ06 578 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 GALR3O60755 368 aaPredicted RBP13.46□□□□□ -0.25
RAB28-205ENST00000508274 WFS1O76024 890 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 WISP3O95389 354 aaPredicted RBP13.46□□□□□ -0.25
RAB28-205ENST00000508274 WDPCPO95876 746 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 ZNF888P0CJ79 500 aaPredicted RBP13.46□□□□□ -0.25
RAB28-205ENST00000508274 GDF5P43026 501 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 SCTRP47872 440 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 TNFSF10P50591 281 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 RHAGQ02094 409 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 CALCOCO2Q13137 446 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 HERC3Q15034 1050 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 ANKRD7Q92527 254 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 TSLPQ969D9 159 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 CTNNAL1Q9UBT7 734 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 ZFP69BQ9UJL9 534 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 MTO1Q9Y2Z2 717 aaKnown RBP13.46□□□□□ -0.25
RAB28-205ENST00000508274 DYRK1BQ9Y463 629 aa13.46□□□□□ -0.25
RAB28-205ENST00000508274 DOPEY1Q5JWR5 2465 aa13.46□□□□□ -0.26
RAB28-205ENST00000508274 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 NCF1BA6NI72 391 aaPredicted RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 NCF1CA8MVU1 366 aaPredicted RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 C4orf51C9J302 202 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 PHGDHO43175 533 aaKnown RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 NCF1P14598 390 aaPredicted RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 ALOX12P18054 663 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 GMPRP36959 345 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 HNF4AP41235 474 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 GPX6P59796 221 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 CDKL1Q00532 357 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 HYAL2Q12891 473 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 PWP1Q13610 501 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 ABRAXAS2Q15018 415 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 TRADDQ15628 312 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 BTBD16Q32M84 506 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 FCRLBQ6BAA4 426 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 NXPE4Q6UWF7 544 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 SYT10Q6XYQ8 523 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 FRA10AC1Q70Z53 315 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 ST6GALNAC3Q8NDV1 305 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 NT5CQ8TCD5 201 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 UTP15Q8TED0 518 aaKnown RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 FAR1Q8WVX9 515 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 HAS2Q92819 552 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 MAGEB10Q96LZ2 347 aaPredicted RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 AICDAQ9GZX7 198 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 KLHL31Q9H511 634 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 PELI2Q9HAT8 420 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 POPDC3Q9HBV1 291 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 NSMCE4AQ9NXX6 385 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 PLEKHB1Q9UF11 243 aaPredicted RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 DIDO1Q9BTC0 2240 aaKnown RBP13.45□□□□□ -0.26
RAB28-205ENST00000508274 NDC80O14777 642 aa13.45□□□□□ -0.26
RAB28-205ENST00000508274 WDR47O94967 919 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms